Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_A07
(402 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 67 1e-12
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 50 1e-07
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 47 1e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 37 0.001
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 35 0.004
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.013
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 31 0.067
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 31 0.088
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 27 1.1
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 2.5
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 25 3.3
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 25 3.3
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 25 4.4
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 5.8
SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces pomb... 25 5.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 66.9 bits (156), Expect = 1e-12
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +1
Query: 172 YLCSAAEEDVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKDDPP 351
+ C++AE V + + ++ +V FYAPWCGHCK L PEY AA L+KD
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDG-- 72
Query: 352 VSLAKVDCTERG 387
+SL +VDCTE G
Sbjct: 73 ISLVEVDCTEEG 84
Score = 60.5 bits (140), Expect = 1e-10
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 187 AEEDVLDLTDSDFSS-VLDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKDDPPVSLA 363
++ED++ L +F V+D+ LV FYAPWCGHCK L P Y A DD V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEY-SDDSNVVVA 411
Query: 364 KVDCTERGTS 393
K+D TE S
Sbjct: 412 KIDATENDIS 421
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 50.4 bits (115), Expect = 1e-07
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 196 DVLDLTDSDFSSV-LDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKDDPPVSLAKVD 372
+V++L +F V +D LV FYA WCG+CKRL P Y G + K++P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYE-TLGKVFKNEPNVEIVKIN 199
Score = 44.8 bits (101), Expect = 5e-06
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +1
Query: 130 MSVSLKSLFLLGLVYLCSAAEEDVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPE 309
M + L S + L L A+ L + +++ AL+ FYA WCGHCK L P
Sbjct: 1 MRLPLLSFVIFALFALVFASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPV 60
Query: 310 YAVAAGILKKDDPPVSLAKVD 372
Y G L +D V + K+D
Sbjct: 61 YE-ELGALFEDHNDVLIGKID 80
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 47.2 bits (107), Expect = 1e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 196 DVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKDDPPVSLAKVDC 375
+ ++L +F + +LV+FYAPWCG+CK+L P Y A L P + VDC
Sbjct: 32 NTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLP---VTAVDC 88
Query: 376 -TERGTSTC 399
++ + C
Sbjct: 89 DADQNRAVC 97
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 37.1 bits (82), Expect = 0.001
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 217 SDFSSVLDQHDTALVMFYAPWCGHCKRLKPEY 312
S+F S++ Q +V F+A WCG CK + P++
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 35.1 bits (77), Expect = 0.004
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 220 DFSSVLDQHDTALVMFYAPWCGHCKRLKP 306
D+++ + +V FYA WCG CK LKP
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP 55
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.5 bits (73), Expect = 0.013
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 208 LTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKP--EYAVAAGILKKDDPPVSLAKVDCTE 381
LTD+D S + + T + +Y P CG CKRL P + V + + +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 382 RGTSTC 399
S+C
Sbjct: 90 E-LSSC 94
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 31.1 bits (67), Expect = 0.067
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 268 YAPWCGHCKRLKPEYAVAAGILKKDDPPVSLAKVDCTER 384
YA WCG CK + P ++ A K P AKV+ E+
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDEQ 63
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 30.7 bits (66), Expect = 0.088
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -2
Query: 236 NTDEKSESVRSNTSSSA-AEHKYTNPSKNKDFSDTDI-IKSRRQLL*NRA*ILTGYENLM 63
N K E ++ SA +HK PS+N++ +D +I I++RRQ++ N+ + +
Sbjct: 399 NICSKEELYETDLKESAPTQHKQPAPSENENKADQEIDIEARRQIIKNKIMAIGRISRVF 458
Query: 62 KMREQEPE 39
+ +E E
Sbjct: 459 SVLREERE 466
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 27.1 bits (57), Expect = 1.1
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = -2
Query: 263 MTKAVSC*SNTDEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSRRQLL 105
++KA+ +T + S+ +NTSS+A ++K P+K+ FSD SR + L
Sbjct: 243 VSKAIQLVKSTSDLG-SLSTNTSSTAQKNKSRKPTKS--FSDAVAAASRAKEL 292
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 239 SNTDEKSESVRSNTSSSAAEHKYTNPSKN--KDFSDTDI 129
+ DE+S S +SN+ S A+ K + K F+DT +
Sbjct: 93 AENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSL 131
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 3.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 106 NNCRRDLIMSVSLKSLFLLGLVYLCSAAEEDVLDLT-----DSDFSSVLDQHDTALVMFY 270
+ R L + L LL L+YL +A ++ + D D V DQ++ + +FY
Sbjct: 47 HKAERRLCRKFDFRILPLLALLYLFNALDKSNVSNAKTNGMDKDLGFVGDQYNIMISIFY 106
Query: 271 APW 279
P+
Sbjct: 107 IPF 109
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 3.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 256 LVMFYAPWCGHCKRL 300
L+ FYAPW CK++
Sbjct: 24 LLNFYAPWAAPCKQM 38
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.0 bits (52), Expect = 4.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 100 FYNNCRRDLIMSVSLKSLFLLGLV 171
FY N R ++++ L +LFL+G+V
Sbjct: 786 FYKNFRTYVVLTWILSNLFLVGIV 809
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 24.6 bits (51), Expect = 5.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 236 NTDEKSESVRSNTSSSAAEHKYTNPSKNKDFS--DTD 132
+T+E S++ + ++S HK +N S+ KD S DTD
Sbjct: 110 STEETSDTNVALNNTSEISHKSSNNSQPKDASVNDTD 146
>SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 24.6 bits (51), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 209 RSNTSSSAAEHKYTNPSKNKDFSDT 135
R + +A+EHKY N N+ F D+
Sbjct: 114 RFESDMTASEHKYLNEFLNQAFRDS 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,511,774
Number of Sequences: 5004
Number of extensions: 27446
Number of successful extensions: 99
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 136158338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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