Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_A06
(296 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 36 1e-04
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 36 1e-04
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.007
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 28 0.021
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 2.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 2.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 3.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 3.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 20 7.4
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 20 7.4
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 9.8
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 35.5 bits (78), Expect = 1e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 102 MDKKRNIINMSVIAHVDHGKSTLTDSLVSKAG 197
M K++ IN+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 35.5 bits (78), Expect = 1e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 102 MDKKRNIINMSVIAHVDHGKSTLTDSLVSKAG 197
M K++ IN+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.9 bits (64), Expect = 0.007
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 111 KRNIINMSVIAHVDHGKSTLTDSL 182
KR+ I ++++ HVDHGK+TL D+L
Sbjct: 143 KRHPI-VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 28.3 bits (60), Expect = 0.021
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 42 QKNLKPSKMVNFTVHEIRAMMDK---KRNIINMSVIAHVDHGKSTLTDSL 182
Q NL + V ++ A+ + ++ IN+ I HV HGKST+ ++
Sbjct: 13 QPNLYKQDLSKLDVSKLTALSREVISRQATINIGTIGHVAHGKSTIVKAI 62
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 1.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 178 PWSRRRVSSPVPGLARHVHR-YAQRRTRQMHHHSST 282
P RR+ S L++ V+ +Q +Q+HHH ST
Sbjct: 785 PEVMRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQST 820
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 2.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 212 QAWRDTFTDTRKDEQDRCITI 274
+ W++ + +D D CIT+
Sbjct: 38 KGWKEVEYEVVRDAYDNCITV 58
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 139 MTDMFMMFLFLSIIARISCTVKFTILDGFRFF 44
M +F+ FL + C+V+ + G R+F
Sbjct: 1 MRSVFVAFLPVKSFRESRCSVRCSAASGLRWF 32
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 3.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 164 DVDRLPGLEGGYHRRCQAWRDTF 232
D D LPG+ G H RDT+
Sbjct: 8 DEDILPGITIGVHILDTCGRDTY 30
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 3.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 164 DVDRLPGLEGGYHRRCQAWRDTF 232
D D LPG+ G H RDT+
Sbjct: 98 DEDILPGITIGVHILDTCGRDTY 120
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 19.8 bits (39), Expect = 7.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 179 GVCQRRFSVVDVSDDRHVYDVPL 111
G+ S VD+ DDR ++ P+
Sbjct: 374 GIFGMALSPVDIHDDRTLFFHPM 396
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.8 bits (39), Expect = 7.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +2
Query: 119 HHKHVCHRSRRPRKI 163
HH V HR +P +
Sbjct: 26 HHNGVVHRDLKPENL 40
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 19.4 bits (38), Expect = 9.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 182 GLEGGYHRRCQAWRDTF 232
G E R+CQ W D F
Sbjct: 34 GDEALKERQCQNWFDKF 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,431
Number of Sequences: 438
Number of extensions: 1618
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6119169
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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