Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A05
         (295 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706...    48   5e-06
BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706...    48   5e-06
AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.             48   5e-06
AF275802-1|AAG23816.1|   76|Homo sapiens PNAS-106 protein.             46   2e-05
AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4 pr...    29   2.0  
AK026817-1|BAB15563.1|  619|Homo sapiens protein ( Homo sapiens ...    27   8.2  

>BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/54 (44%), Positives = 28/54 (51%)
 Frame = +1

Query: 133 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCVVCKAQMPDP 294
           MARG QKI                 GH   DQK AA+ AL++ C VC+ QMPDP
Sbjct: 1   MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDP 51


>BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/54 (44%), Positives = 28/54 (51%)
 Frame = +1

Query: 133 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCVVCKAQMPDP 294
           MARG QKI                 GH   DQK AA+ AL++ C VC+ QMPDP
Sbjct: 1   MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDP 51


>AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.
          Length = 76

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/54 (44%), Positives = 28/54 (51%)
 Frame = +1

Query: 133 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCVVCKAQMPDP 294
           MARG QKI                 GH   DQK AA+ AL++ C VC+ QMPDP
Sbjct: 1   MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDP 51


>AF275802-1|AAG23816.1|   76|Homo sapiens PNAS-106 protein.
          Length = 76

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +1

Query: 133 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCVVCKAQMPDP 294
           MARG QKI                 GH+   QK AA+ AL++ C VC+ QMPDP
Sbjct: 1   MARGQQKIQSQQKKAKKQAGQKKKQGHA---QKAAAKAALIYTCTVCRTQMPDP 51


>AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4
           protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 120 LVTQDGSGAPENSVTGKGC*ENV*DEETTGSQCY*PEEGCTKSISPCVCSLQGSNAGS 293
           L   D SG+ +    G        DEE  G  C     GC++    C C+  G +AGS
Sbjct: 22  LQNSDHSGSVQGLAPGLPSGSGAEDEEAAGGGCCPDGGGCSRCC--CCCAGSGGSAGS 77


>AK026817-1|BAB15563.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23164 fis, clone LNG09764. ).
          Length = 619

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 133 SCVTKLYVAGATDIFAILLKKMNLSSLYSTRL 38
           SCV K   +   DIFA L   + +  +Y TRL
Sbjct: 77  SCVNKNRNSSIADIFATLESMLEMLQMYQTRL 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,832,996
Number of Sequences: 237096
Number of extensions: 615260
Number of successful extensions: 1046
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)