Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A05
         (295 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   4.2  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   5.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   5.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   5.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   7.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   9.6  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 221 VAL*PCCFFILDIFS 177
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 221 VAL*PCCFFILDIFS 177
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 181 SQQPLPVTEFSGAPEP 134
           SQQPL +++ S +P P
Sbjct: 871 SQQPLNLSKKSPSPSP 886


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 66  FIFFSNIANISVAPATYNLVTQDGSGAPENSVT 164
           F+F +++ N S A     L+ +  +  P  SVT
Sbjct: 314 FMFIADLNNQSTASDFKQLIDRWVANVPNGSVT 346


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 157 EFSGAPEPSCVTKLYVAGATDIFAILLKKMNLSSLYSTRLQYV 29
           + +G P P  V +   A    +    ++  N  SLY T++Q +
Sbjct: 333 DVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLI 375


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 95  YICYIAKEDELKFFILNEIAICANLLESKPR 3
           Y C +  ED +  F   +  IC N+   K +
Sbjct: 653 YECGLRFEDPMISFQPGDTIICINIKRQKEK 683


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 72  FFSNIANISVAPATYN 119
           F+++ AN+ + P  YN
Sbjct: 228 FYNDDANVYILPDPYN 243



 Score = 19.4 bits (38), Expect = 9.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 63  KFIFFSNIANISVAPATYNLVTQDGSG 143
           KF   S    I V+P TY L+    SG
Sbjct: 616 KFESLSEPLRIHVSPTTYILLKYPISG 642


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,306
Number of Sequences: 438
Number of extensions: 1073
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)