Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P24
         (637 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid alpha-mann...    55   2e-07
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida...    55   2e-07
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida...    55   2e-07
U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.      55   2e-07
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla...    55   2e-07
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla...    55   2e-07
AF372702-1|AAM15528.1|  665|Homo sapiens zinc finger protein 333...    34   0.49 
AB058709-1|BAB47435.1|  481|Homo sapiens KIAA1806 protein protein.     34   0.49 

>U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid
           alpha-mannosidase protein.
          Length = 988

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 426 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 480

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 481 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 530


>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1010

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 448 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 502

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 503 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 552


>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1011

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 449 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 503

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 504 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 553


>U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.
          Length = 987

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 425 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 479

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 480 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 529


>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
           2B, member 1 protein.
          Length = 1011

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 449 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 503

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 504 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 553


>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
           2B, member 1 precursor variant protein.
          Length = 1007

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = +2

Query: 5   ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNESSCLT 184
           ++GT +QHV +DY R L        ++   A  +++  K      F + +   N S C  
Sbjct: 445 VSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKDH----FTFCQ-QLNISICPL 499

Query: 185 AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 334
           ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 500 SQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 549


>AF372702-1|AAM15528.1|  665|Homo sapiens zinc finger protein 333
           protein.
          Length = 665

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +2

Query: 98  FNKMKQGKSSKQPLFNYDRCHFNESSCLTAETSDNFIVTIYNSLAWKVK 244
           +N++++  +S +PLF Y R H  E+SC   E  ++F  + +  +  K++
Sbjct: 312 YNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR 360


>AB058709-1|BAB47435.1|  481|Homo sapiens KIAA1806 protein protein.
          Length = 481

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +2

Query: 98  FNKMKQGKSSKQPLFNYDRCHFNESSCLTAETSDNFIVTIYNSLAWKVK 244
           +N++++  +S +PLF Y R H  E+SC   E  ++F  + +  +  K++
Sbjct: 128 YNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,368,922
Number of Sequences: 237096
Number of extensions: 1334136
Number of successful extensions: 2448
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2442
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)