BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P24
(637 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058271-1|AAL13500.1| 982|Drosophila melanogaster GH02475p pro... 87 2e-17
AE014134-1562|AAF52710.1| 982|Drosophila melanogaster CG9466-PA... 87 2e-17
AY119107-1|AAM50967.1| 1007|Drosophila melanogaster RE08556p pro... 81 9e-16
AE014134-1563|AAF52711.2| 1007|Drosophila melanogaster CG9468-PA... 81 9e-16
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241... 81 1e-15
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB... 81 1e-15
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA... 81 1e-15
AY071249-1|AAL48871.2| 1016|Drosophila melanogaster RE28991p pro... 79 5e-15
AE014134-1560|AAF52708.2| 1003|Drosophila melanogaster CG9463-PA... 79 5e-15
AE014134-1561|AAF52709.1| 942|Drosophila melanogaster CG9465-PA... 79 7e-15
BT024287-1|ABC86349.1| 968|Drosophila melanogaster IP13633p pro... 63 3e-10
AE014134-1894|AAF52957.1| 950|Drosophila melanogaster CG5322-PA... 63 3e-10
X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi... 34 0.14
AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p pro... 34 0.14
AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster alpha-mannos... 34 0.14
AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA... 34 0.14
AE014297-2910|AAF55836.3| 261|Drosophila melanogaster CG31189-P... 30 2.3
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA... 29 5.3
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 29 7.0
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 29 7.0
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 29 7.0
>AY058271-1|AAL13500.1| 982|Drosophila melanogaster GH02475p
protein.
Length = 982
Score = 86.6 bits (205), Expect = 2e-17
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQHV+ DY+RIL A+ + + A K+ + P ++ C N S C
Sbjct: 417 ITGTEKQHVSDDYDRILYDAIVGGVKTAGDALRKL-----TNLPNGEFESCLQLNISECA 471
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T + +DN +VT+YN+LA K+++ +PV +Y+V D KG + S + +P + +
Sbjct: 472 FTKDGADNVVVTLYNALAHTTKQYVRVPVKNENYQVTDEKGRVVASEIVPVPAEVLALEF 531
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKK 439
R S H L F + ++ ++Y+KK
Sbjct: 532 RDSDTQHELVFKASVDKIA--NYYIKK 556
>AE014134-1562|AAF52710.1| 982|Drosophila melanogaster CG9466-PA
protein.
Length = 982
Score = 86.6 bits (205), Expect = 2e-17
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQHV+ DY+RIL A+ + + A K+ + P ++ C N S C
Sbjct: 417 ITGTEKQHVSDDYDRILYDAIVGGVKTAGDALRKL-----TNLPNGEFESCLQLNISECA 471
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T + +DN +VT+YN+LA K+++ +PV +Y+V D KG + S + +P + +
Sbjct: 472 FTKDGADNVVVTLYNALAHTTKQYVRVPVKNENYQVTDEKGRVVASEIVPVPAEVLALEF 531
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKK 439
R S H L F + ++ ++Y+KK
Sbjct: 532 RDSDTQHELVFKASVDKIA--NYYIKK 556
>AY119107-1|AAM50967.1| 1007|Drosophila melanogaster RE08556p
protein.
Length = 1007
Score = 81.4 bits (192), Expect = 9e-16
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQHV+ DY+RIL A+ + ++ K+ + P ++ C N S C
Sbjct: 418 ITGTEKQHVSDDYDRILYDAILGGVNTARDGLRKL-----TNLPNGEFESCLQLNISECA 472
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T + +DN +VT+YN LA +++ +PV +YEV D KG + S + + + +
Sbjct: 473 FTKDDADNVVVTLYNPLAHTSTQYVRVPVKNENYEVTDEKGRVVASEVVPVAWQVLALEF 532
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDT 457
R + H L F + ++ ++Y+KK A +T
Sbjct: 533 RNNDTQHELVFKASVDKIA--NYYIKKVASQET 563
>AE014134-1563|AAF52711.2| 1007|Drosophila melanogaster CG9468-PA
protein.
Length = 1007
Score = 81.4 bits (192), Expect = 9e-16
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQHV+ DY+RIL A+ + ++ K+ + P ++ C N S C
Sbjct: 418 ITGTEKQHVSDDYDRILYDAILGGVNTARDGLRKL-----TNLPNGEFESCLQLNISECA 472
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T + +DN +VT+YN LA +++ +PV +YEV D KG + S + + + +
Sbjct: 473 FTKDDADNVVVTLYNPLAHTSTQYVRVPVKNENYEVTDEKGRVVASEVVPVAWQVLALEF 532
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDT 457
R + H L F + ++ ++Y+KK A +T
Sbjct: 533 RNNDTQHELVFKASVDKIA--NYYIKKVASQET 563
>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
protein.
Length = 1080
Score = 81.0 bits (191), Expect = 1e-15
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMK-QGK-----SSKQPLFNYDRCHF- 163
ITGTEK+ V DY + ++ A ++ A N++ Q K +S + +F + C
Sbjct: 429 ITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALL 488
Query: 164 NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFL 343
N +SC +E +D F +T+YN LA V +++ IPV ++Y + D KG L S IP L
Sbjct: 489 NITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVL 548
Query: 344 KHIPTRKSFATHILYFL-TELSPLSMTSFYVKK 439
I R S A + + FL T + L ++YV+K
Sbjct: 549 IDIKHRNSTAKYEIVFLATNIPALGYRTYYVEK 581
>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
isoform B protein.
Length = 1080
Score = 81.0 bits (191), Expect = 1e-15
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMK-QGK-----SSKQPLFNYDRCHF- 163
ITGTEK+ V DY + ++ A ++ A N++ Q K +S + +F + C
Sbjct: 429 ITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALL 488
Query: 164 NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFL 343
N +SC +E +D F +T+YN LA V +++ IPV ++Y + D KG L S IP L
Sbjct: 489 NITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVL 548
Query: 344 KHIPTRKSFATHILYFL-TELSPLSMTSFYVKK 439
I R S A + + FL T + L ++YV+K
Sbjct: 549 IDIKHRNSTAKYEIVFLATNIPALGYRTYYVEK 581
>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
isoform A protein.
Length = 1080
Score = 81.0 bits (191), Expect = 1e-15
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMK-QGK-----SSKQPLFNYDRCHF- 163
ITGTEK+ V DY + ++ A ++ A N++ Q K +S + +F + C
Sbjct: 429 ITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALL 488
Query: 164 NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFL 343
N +SC +E +D F +T+YN LA V +++ IPV ++Y + D KG L S IP L
Sbjct: 489 NITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVL 548
Query: 344 KHIPTRKSFATHILYFL-TELSPLSMTSFYVKK 439
I R S A + + FL T + L ++YV+K
Sbjct: 549 IDIKHRNSTAKYEIVFLATNIPALGYRTYYVEK 581
>AY071249-1|AAL48871.2| 1016|Drosophila melanogaster RE28991p
protein.
Length = 1016
Score = 79.0 bits (186), Expect = 5e-15
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQ V++DY+R+L A+ ++ A + + QP + C N S C
Sbjct: 430 ITGTEKQEVSNDYDRLLYDAILGGANTARDALRVL-----TNQPNGEFQSCLKLNISECA 484
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T E +D+F+VT+YN LA +++ +PV + Y+V D KG + S L +P + +
Sbjct: 485 FTKENADDFMVTLYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEF 544
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDTI 460
R + H L F ++ ++ ++++KK K+ +
Sbjct: 545 RNNDTQHELVFKASVNKIA--TYFIKKIDKTTEV 576
>AE014134-1560|AAF52708.2| 1003|Drosophila melanogaster CG9463-PA
protein.
Length = 1003
Score = 79.0 bits (186), Expect = 5e-15
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQ V++DY+R+L A+ ++ A + + QP + C N S C
Sbjct: 417 ITGTEKQEVSNDYDRLLYDAILGGANTARDALRVL-----TNQPNGEFQSCLKLNISECA 471
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T E +D+F+VT+YN LA +++ +PV + Y+V D KG + S L +P + +
Sbjct: 472 FTKENADDFMVTLYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEF 531
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDTI 460
R + H L F ++ ++ ++++KK K+ +
Sbjct: 532 RNNDTQHELVFKASVNKIA--TYFIKKIDKTTEV 563
>AE014134-1561|AAF52709.1| 942|Drosophila melanogaster CG9465-PA
protein.
Length = 942
Score = 78.6 bits (185), Expect = 7e-15
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
ITGTEKQ V+ DY+R++ +A+ A ++ A + + P ++ C N S C
Sbjct: 382 ITGTEKQAVSDDYDRMMYEAIVGASNNARDALRLL-----TNMPYGEFESCLRLNISECA 436
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T + +DN +VT+YN LA +++ IPV + +Y+V D KG +PS + +P + +
Sbjct: 437 FTKDGADNVLVTLYNPLAHSSTQYVRIPVKEENYQVTDEKGRTVPSEVVPVPWQVLALEY 496
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSD 454
R + H L F ++ +S S+ +KK S+
Sbjct: 497 RSNDTQHELVFKATVNKVS--SYSIKKVESSE 526
>BT024287-1|ABC86349.1| 968|Drosophila melanogaster IP13633p
protein.
Length = 968
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
+TGTEKQ V DY+R+L +A+ A ++ A + S + ++ C N S C
Sbjct: 400 VTGTEKQAVASDYDRLLFKAIVGAENSARDALRSLTNLTSGE-----FESCLELNISVCA 454
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T +T++N IVT+ N LA +++ +P +Y V D KG ++ S + +P + +
Sbjct: 455 FTQDTANNVIVTLVNPLAHSSTQYVRVPAKNENYIVTDEKGREVFSEVVPVPWQVLALEH 514
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDTIKRD 469
R + H L F E S + +F ++ I D
Sbjct: 515 RPNDTQHELVF--EASVDKIANFLIRVLPSPKNIAED 549
>AE014134-1894|AAF52957.1| 950|Drosophila melanogaster CG5322-PA
protein.
Length = 950
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRC-HFNESSC- 178
+TGTEKQ V DY+R+L +A+ A ++ A + S + ++ C N S C
Sbjct: 382 VTGTEKQAVASDYDRLLFKAIVGAENSARDALRSLTNLTSGE-----FESCLELNISVCA 436
Query: 179 LTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIPT 358
T +T++N IVT+ N LA +++ +P +Y V D KG ++ S + +P + +
Sbjct: 437 FTQDTANNVIVTLVNPLAHSSTQYVRVPAKNENYIVTDEKGREVFSEVVPVPWQVLALEH 496
Query: 359 RKSFATHILYFLTELSPLSMTSFYVKKHAKSDTIKRD 469
R + H L F E S + +F ++ I D
Sbjct: 497 RPNDTQHELVF--EASVDKIANFLIRVLPSPKNIAED 531
>X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi
alpha-mannosidaseII protein.
Length = 1108
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNES 172
ITGT K HV DYE+ + +A+ ++ QQ+ ++ S P F++ ++S
Sbjct: 537 ITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDS 592
>AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p
protein.
Length = 1108
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNES 172
ITGT K HV DYE+ + +A+ ++ QQ+ ++ S P F++ ++S
Sbjct: 537 ITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDS 592
>AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster
alpha-mannosidase II protein.
Length = 1108
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNES 172
ITGT K HV DYE+ + +A+ ++ QQ+ ++ S P F++ ++S
Sbjct: 537 ITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDS 592
>AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA
protein.
Length = 1108
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 5 ITGTEKQHVTHDYERILNQAVDDALIISQQAFNKMKQGKSSKQPLFNYDRCHFNES 172
ITGT K HV DYE+ + +A+ ++ QQ+ ++ S P F++ ++S
Sbjct: 537 ITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDS 592
>AE014297-2910|AAF55836.3| 261|Drosophila melanogaster CG31189-PA
protein.
Length = 261
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 107 MKQGKSSKQPLFNYDRCHFNESSCL 181
M G S + +FN ++CHF +S+CL
Sbjct: 17 MISGASLRAWVFNVEKCHFGDSTCL 41
>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
protein.
Length = 1118
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 257 IPVVKADYEVYDPKGNKLPSNLAEIPDFLKHIP 355
IP ++ ++ DP G+++PSNL P + IP
Sbjct: 320 IPPLRPPNQIGDPPGSQMPSNLGIYPPSMGWIP 352
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 158 HFNESSCLTAETSDNFIVTIYNSLAWKVKK 247
+FN+ SC + D+ IV IYN WK+K+
Sbjct: 568 NFNDISCHLFDVDDDAIVAIYN--YWKLKR 595
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 158 HFNESSCLTAETSDNFIVTIYNSLAWKVKK 247
+FN+ SC + D+ IV IYN WK+K+
Sbjct: 568 NFNDISCHLFDVDDDAIVAIYN--YWKLKR 595
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 158 HFNESSCLTAETSDNFIVTIYNSLAWKVKK 247
+FN+ SC + D+ IV IYN WK+K+
Sbjct: 528 NFNDISCHLFDVDDDAIVAIYN--YWKLKR 555
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,594,954
Number of Sequences: 53049
Number of extensions: 424905
Number of successful extensions: 1379
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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