Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P24
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.7  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 388 IQYMCGKRFPRRNMFEKIRYF 326
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 388 IQYMCGKRFPRRNMFEKIRYF 326
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 KKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLK 346
           KK  EI     +   Y P G+KLP N+  IPD ++
Sbjct: 49  KKLTEIINETHENVKYLP-GHKLPPNIIAIPDVVE 82


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 612 ISLTFCSIVPNLSLTVFASSRVSMSTKP 529
           + L+FC ++   + TV+  S V +S  P
Sbjct: 149 LRLSFCVVLACSTATVYVMSVVGLSKAP 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,187
Number of Sequences: 438
Number of extensions: 3152
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)