Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P23
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    25   1.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   2.1  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   6.4  

>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 173 LLEAHIHVIVDTVLNNAQNAA 111
           ++E+H+  ++ T ++  QNAA
Sbjct: 1   MVESHVRALISTTISTLQNAA 21


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +3

Query: 234 VTLESKGSPRSARALEPLSDEPKAREAQVESRLVDSA--ADFLENYVIQFKMPSSAVEGI 407
           +T   + +P  +     L  E   +E +   RL   A   D    +  +FK+  +A++ +
Sbjct: 262 MTKRKRYTPNKSAFWWTLEIEALRKECKHRDRLAQRAFHTDLYSTFRDEFKVARNALKRL 321

Query: 408 RRSLRRRSW*E 440
            +  R+R W E
Sbjct: 322 IKHTRQRKWKE 332


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 373 SSKCHHLLSKESEGPLEEGR 432
           SSKCH     + EGP    R
Sbjct: 233 SSKCHRCAEDKHEGPCTRER 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,631
Number of Sequences: 2352
Number of extensions: 8681
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)