Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P22
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001747-1|AAN71502.1|  421|Drosophila melanogaster RE74585p pro...    29   4.4  
AE014297-123|AAN13285.1|  421|Drosophila melanogaster CG9775-PC,...    29   4.4  
AE014297-122|AAF52112.1|  421|Drosophila melanogaster CG9775-PA,...    29   4.4  

>BT001747-1|AAN71502.1|  421|Drosophila melanogaster RE74585p
           protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +1

Query: 52  TQRKQGPKTMLTKEELDAQLEQYMAGTKAALD 147
           T + Q P+  + +E+LD +L+QYM+ TK+ +D
Sbjct: 388 TGKPQRPE--VKREDLDMELDQYMSTTKSEMD 417


>AE014297-123|AAN13285.1|  421|Drosophila melanogaster CG9775-PC,
           isoform C protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +1

Query: 52  TQRKQGPKTMLTKEELDAQLEQYMAGTKAALD 147
           T + Q P+  + +E+LD +L+QYM+ TK+ +D
Sbjct: 388 TGKPQRPE--VKREDLDMELDQYMSTTKSEMD 417


>AE014297-122|AAF52112.1|  421|Drosophila melanogaster CG9775-PA,
           isoform A protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +1

Query: 52  TQRKQGPKTMLTKEELDAQLEQYMAGTKAALD 147
           T + Q P+  + +E+LD +L+QYM+ TK+ +D
Sbjct: 388 TGKPQRPE--VKREDLDMELDQYMSTTKSEMD 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,654,731
Number of Sequences: 53049
Number of extensions: 416107
Number of successful extensions: 921
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)