BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P21
(418 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004877-1|AAO45233.1| 370|Drosophila melanogaster GH26270p pro... 107 6e-24
AE014297-3078|AAF55942.1| 370|Drosophila melanogaster CG6439-PA... 107 6e-24
AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p pro... 48 4e-06
AE014298-2859|AAF48965.1| 377|Drosophila melanogaster CG12233-P... 48 4e-06
AE014298-2858|AAN09496.1| 354|Drosophila melanogaster CG12233-P... 48 4e-06
AY118436-1|AAM48465.1| 402|Drosophila melanogaster RH49423p pro... 48 5e-06
AE014297-3836|AAF56494.2| 402|Drosophila melanogaster CG5028-PA... 48 5e-06
AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p pro... 42 4e-04
AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-P... 42 4e-04
BT012507-1|AAS93778.1| 391|Drosophila melanogaster AT07735p pro... 35 0.050
AM293939-1|CAL25841.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293938-1|CAL25840.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293937-1|CAL25839.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293936-1|CAL25838.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293935-1|CAL25837.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293934-1|CAL25836.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293933-1|CAL25835.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293932-1|CAL25834.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293931-1|CAL25833.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293930-1|CAL25832.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AM293929-1|CAL25831.1| 391|Drosophila melanogaster CG3483 protein. 35 0.050
AE013599-3872|AAF47205.1| 391|Drosophila melanogaster CG3483-PA... 35 0.050
AY061606-1|AAL29154.1| 433|Drosophila melanogaster SD07148p pro... 32 0.35
AF145307-1|AAF08388.1| 433|Drosophila melanogaster 26S proteaso... 32 0.35
AE013599-469|AAF59219.1| 433|Drosophila melanogaster CG1341-PA ... 32 0.35
AE014298-3106|AAF50837.1| 1713|Drosophila melanogaster CG1718-PA... 29 1.9
AE014296-2028|AAF50013.1| 735|Drosophila melanogaster CG14131-P... 29 3.3
L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein. 28 4.3
BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p pro... 28 4.3
AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-P... 28 4.3
AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-P... 28 4.3
AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-P... 28 4.3
AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-P... 28 4.3
AE014134-2379|AAF53321.2| 513|Drosophila melanogaster CG18507-P... 28 5.7
>BT004877-1|AAO45233.1| 370|Drosophila melanogaster GH26270p
protein.
Length = 370
Score = 107 bits (257), Expect = 6e-24
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = +1
Query: 232 RIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVNSIAKNK 411
R CTLIPGDGVGPELVYS+QEVFKA+S+PVDFE +F SE+NP LSA LEDVV SI KNK
Sbjct: 37 RTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNK 96
Query: 412 IC 417
+C
Sbjct: 97 VC 98
>AE014297-3078|AAF55942.1| 370|Drosophila melanogaster CG6439-PA
protein.
Length = 370
Score = 107 bits (257), Expect = 6e-24
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = +1
Query: 232 RIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVNSIAKNK 411
R CTLIPGDGVGPELVYS+QEVFKA+S+PVDFE +F SE+NP LSA LEDVV SI KNK
Sbjct: 37 RTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNK 96
Query: 412 IC 417
+C
Sbjct: 97 VC 98
>AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p
protein.
Length = 229
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/36 (50%), Positives = 30/36 (83%)
Frame = +1
Query: 229 GRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFES 336
G K TLIPGDG+GPE+ +VQ++F A+++P+++E+
Sbjct: 23 GTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEA 58
>AE014298-2859|AAF48965.1| 377|Drosophila melanogaster CG12233-PB,
isoform B protein.
Length = 377
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/36 (50%), Positives = 30/36 (83%)
Frame = +1
Query: 229 GRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFES 336
G K TLIPGDG+GPE+ +VQ++F A+++P+++E+
Sbjct: 46 GTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEA 81
>AE014298-2858|AAN09496.1| 354|Drosophila melanogaster CG12233-PA,
isoform A protein.
Length = 354
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/36 (50%), Positives = 30/36 (83%)
Frame = +1
Query: 229 GRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFES 336
G K TLIPGDG+GPE+ +VQ++F A+++P+++E+
Sbjct: 23 GTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEA 58
>AY118436-1|AAM48465.1| 402|Drosophila melanogaster RH49423p
protein.
Length = 402
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 211 PNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSA--PLED 384
P+A GR T++PG G+GPEL+ V+E+F+ P+DFE +++P+ L+
Sbjct: 50 PSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVI---DIDPSTEGNDDLDY 106
Query: 385 VVNSIAKNKI 414
+ SI +N +
Sbjct: 107 AITSIKRNGV 116
>AE014297-3836|AAF56494.2| 402|Drosophila melanogaster CG5028-PA
protein.
Length = 402
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 211 PNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSA--PLED 384
P+A GR T++PG G+GPEL+ V+E+F+ P+DFE +++P+ L+
Sbjct: 50 PSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVI---DIDPSTEGNDDLDY 106
Query: 385 VVNSIAKNKI 414
+ SI +N +
Sbjct: 107 AITSIKRNGV 116
>AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p
protein.
Length = 719
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 199 GSLQPNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEV--NPTLSA 372
G A+ E R+ TL+PGDG+GPE+ +V ++ +A+ P+ FE + V + +++
Sbjct: 372 GGKSGKASGEPRV-ITLMPGDGIGPEISMAVIKILEAAKTPLIFEPVDVTPVLNSQGMTS 430
Query: 373 PLEDVVNSIAKNKI 414
E V+ S+ + K+
Sbjct: 431 VPEQVIESMNRTKV 444
>AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-PA
protein.
Length = 719
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 199 GSLQPNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEV--NPTLSA 372
G A+ E R+ TL+PGDG+GPE+ +V ++ +A+ P+ FE + V + +++
Sbjct: 372 GGKSGKASGEPRV-ITLMPGDGIGPEISMAVIKILEAAKTPLIFEPVDVTPVLNSQGMTS 430
Query: 373 PLEDVVNSIAKNKI 414
E V+ S+ + K+
Sbjct: 431 VPEQVIESMNRTKV 444
>BT012507-1|AAS93778.1| 391|Drosophila melanogaster AT07735p
protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293939-1|CAL25841.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293938-1|CAL25840.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293937-1|CAL25839.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293936-1|CAL25838.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293935-1|CAL25837.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293934-1|CAL25836.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293933-1|CAL25835.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293932-1|CAL25834.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293931-1|CAL25833.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293930-1|CAL25832.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AM293929-1|CAL25831.1| 391|Drosophila melanogaster CG3483 protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AE013599-3872|AAF47205.1| 391|Drosophila melanogaster CG3483-PA
protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 238 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 333
K TLI G+GVG EL+ +VQEV A P++++
Sbjct: 71 KVTLINGEGVGRELMDAVQEVICAVKAPIEWD 102
>AY061606-1|AAL29154.1| 433|Drosophila melanogaster SD07148p
protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 GSQHIGKGVHTSSVNTERNVRFAPIGSLQPNAT-KEGRIKCT 246
G HI K +H S++ ER++RF + L PN+T E R CT
Sbjct: 350 GRSHIFK-IHARSMSVERDIRFDLLARLCPNSTGAEIRSVCT 390
>AF145307-1|AAF08388.1| 433|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p48B protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 GSQHIGKGVHTSSVNTERNVRFAPIGSLQPNAT-KEGRIKCT 246
G HI K +H S++ ER++RF + L PN+T E R CT
Sbjct: 350 GRSHIFK-IHARSMSVERDIRFDLLARLCPNSTGAEIRSVCT 390
>AE013599-469|AAF59219.1| 433|Drosophila melanogaster CG1341-PA
protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 GSQHIGKGVHTSSVNTERNVRFAPIGSLQPNAT-KEGRIKCT 246
G HI K +H S++ ER++RF + L PN+T E R CT
Sbjct: 350 GRSHIFK-IHARSMSVERDIRFDLLARLCPNSTGAEIRSVCT 390
>AE014298-3106|AAF50837.1| 1713|Drosophila melanogaster CG1718-PA
protein.
Length = 1713
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 343 FSEVNPTLSAPLEDVVNSIAKNKIC 417
+S VNP L +E+ S+ KNKIC
Sbjct: 85 YSPVNPVLKKLVEEAWQSLGKNKIC 109
>AE014296-2028|AAF50013.1| 735|Drosophila melanogaster CG14131-PA
protein.
Length = 735
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 160 SVNTERNVRFAPIGSLQPNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIP 321
S N+ R V+F P+ + T E + L P DG+G + SV V +IP
Sbjct: 256 SKNSGRYVKFEPVDDVPEILTPEDPVPELLTPDDGLGGAM--SVTAVVHRGAIP 307
>L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein.
Length = 1698
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p
protein.
Length = 703
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-PD,
isoform D protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-PA,
isoform A protein.
Length = 1698
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-PB,
isoform B protein.
Length = 889
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-PC,
isoform C protein.
Length = 703
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 214 NATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVN 393
N EGR+ CT + +G LV S + A +P F ++ P +A LED V
Sbjct: 133 NDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDF-KIAPNQTAELEDKVM 191
Query: 394 SIAK 405
+ K
Sbjct: 192 DLHK 195
>AE014134-2379|AAF53321.2| 513|Drosophila melanogaster CG18507-PB,
isoform B protein.
Length = 513
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 105 FSCPCTGITTHRQGSPYKFGKH*EKCTFCAHWFTATQ 215
F CPC I H Q P GK KC HW A++
Sbjct: 475 FQCPCQYIKEHLQCKPR--GKF--KCCNLVHWVMASE 507
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,216,562
Number of Sequences: 53049
Number of extensions: 440934
Number of successful extensions: 1374
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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