Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P18
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 136 7e-32
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 135 9e-32
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 135 9e-32
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 126 7e-29
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 113 3e-25
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 87 4e-17
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 2.2
AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens ... 30 5.1
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 30 6.7
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 30 6.7
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 30 6.7
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 30 6.7
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 30 6.7
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 30 6.7
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 30 6.7
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 30 6.7
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 30 6.7
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 30 6.7
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 30 6.7
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 136 bits (328), Expect = 7e-32
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L GV R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 135 bits (327), Expect = 9e-32
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 433 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 126 bits (303), Expect = 7e-29
Identities = 70/168 (41%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
Frame = +1
Query: 91 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 258
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 259 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 432
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 433 XXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 166 LKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 213
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 113 bits (273), Expect = 3e-25
Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Frame = +1
Query: 115 VLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYP 294
+ S+ MY +K Y V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 295 TQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 468
T+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR T
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 469 PFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 573
++ PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 178 LWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 87.0 bits (206), Expect = 4e-17
Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = +1
Query: 124 FSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYPTQD 303
+S+ MY +K Y V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 2 YSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 304 KIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGP 471
R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR TGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGP 117
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 443 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 327
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ35268 fis, clone PROST2005285, weakly similar to
CYCLIN G-ASSOCIATED KINASE (EC 2.7.1.-). ).
Length = 251
Score = 30.3 bits (65), Expect = 5.1
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 411 WQACRARWSVAEWSATLH-WTFCFQRVS-PAQDSAALCHWNID*GRPGRFQATGA 569
W C A WS +AT H W+ C S Q C W R G +A GA
Sbjct: 122 WSICCALWSRRLQTATFHPWSICCTTWSRRLQTGTCHCRWAWQPSRTGWPEARGA 176
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 81 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 137
Query: 321 RT 316
T
Sbjct: 138 ET 139
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 173 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 229
Query: 321 RT 316
T
Sbjct: 230 ET 231
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 321 RT 316
T
Sbjct: 255 ET 256
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 321 RT 316
T
Sbjct: 255 ET 256
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 501 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 322
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 321 RT 316
T
Sbjct: 232 ET 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,615,532
Number of Sequences: 237096
Number of extensions: 1935330
Number of successful extensions: 8373
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8340
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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