Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P17
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.31 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.31 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   8.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   8.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    20   8.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   8.9  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 119 DCLGQSTKVFLEKTSKGIKQYNIRPIDPWFISSLDVLADEDMRLL 253
           D +    ++FL    +G+K Y I  +D      +++L  ED+ L+
Sbjct: 47  DIMRTPEQMFLADRERGLKYYPIYKLDVCGTGGVNLLNPEDVELV 91


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 119 DCLGQSTKVFLEKTSKGIKQYNIRPIDPWFISSLDVLADEDMRLL 253
           D +    ++FL +  +G+K Y I  +D      +++L  ED+ L+
Sbjct: 47  DIMRTPEQLFLAERERGLKYYPIYKLDVCGNGGVNLLNPEDVELV 91


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 80  DGSLLVPCDMTDLDCLGQSTKVFLEKTSKGIK 175
           DGSLL+  + TD+   G      L+KT+  +K
Sbjct: 63  DGSLLILDNATDITNGGLQKVAALKKTNPALK 94


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 123 VWVSRRRYFLRKQVKAS 173
           VW S RR  LRKQ+ ++
Sbjct: 266 VWFSNRRARLRKQITSA 282


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 123 VWVSRRRYFLRKQVKASNSIISAP*TLGSYHP 218
           +W   RR   +K  K +   +++     S HP
Sbjct: 229 IWFQNRRMKAKKDTKFTEQSVTSTFDFLSLHP 260


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 123 VWVSRRRYFLRKQVKASNSIISAP*TLGSYHP 218
           +W   RR   +K  K +   +++     S HP
Sbjct: 229 IWFQNRRMKAKKDTKFTEQSVTSTFDFLSLHP 260


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 123 VWVSRRRYFLRKQVKASNSI 182
           +W   RR   RKQVK    +
Sbjct: 202 IWFQNRRAKERKQVKKREEV 221


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 123 VWVSRRRYFLRKQVKASNSIISAP*TLGSYHP 218
           +W   RR   +K  K +   +++     S HP
Sbjct: 229 IWFQNRRMKAKKDTKFTEQSVTSTFDFLSLHP 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,955
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)