Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P15
         (405 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16PE0 Cluster: Centrosomal protein, putative; n=2; Aed...    40   0.019
UniRef50_UPI0000D56FD3 Cluster: PREDICTED: similar to CG9660-PA,...    38   0.076
UniRef50_O46112 Cluster: Toucan protein; n=8; Drosophila melanog...    33   1.6  
UniRef50_Q1NUY0 Cluster: Glycosyl transferase, family 2; n=2; de...    33   2.9  
UniRef50_UPI0000E1EC71 Cluster: PREDICTED: hypothetical protein;...    32   5.0  
UniRef50_Q08MH1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_A2VSU2 Cluster: NAD/NADP transhydrogenase beta subunit;...    31   8.7  

>UniRef50_Q16PE0 Cluster: Centrosomal protein, putative; n=2; Aedes
           aegypti|Rep: Centrosomal protein, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 628

 Score = 39.9 bits (89), Expect = 0.019
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +3

Query: 252 VKGVVEKHDSVSWVLEIEETPEEM 323
           +KGVVEK DSVSWVLE+++ P E+
Sbjct: 380 IKGVVEKSDSVSWVLEMDDEPPEI 403


>UniRef50_UPI0000D56FD3 Cluster: PREDICTED: similar to CG9660-PA,
            isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG9660-PA, isoform A - Tribolium castaneum
          Length = 1355

 Score = 37.9 bits (84), Expect = 0.076
 Identities = 16/22 (72%), Positives = 21/22 (95%)
 Frame = +3

Query: 252  VKGVVEKHDSVSWVLEIEETPE 317
            VKGVVEK DSVS+VL+++E+PE
Sbjct: 1199 VKGVVEKSDSVSYVLDLDESPE 1220


>UniRef50_O46112 Cluster: Toucan protein; n=8; Drosophila
            melanogaster|Rep: Toucan protein - Drosophila
            melanogaster (Fruit fly)
          Length = 2176

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 12/19 (63%), Positives = 18/19 (94%)
 Frame = +3

Query: 252  VKGVVEKHDSVSWVLEIEE 308
            +KG++E++DSVSW LEIE+
Sbjct: 1925 MKGMIERNDSVSWTLEIED 1943


>UniRef50_Q1NUY0 Cluster: Glycosyl transferase, family 2; n=2; delta
           proteobacterium MLMS-1|Rep: Glycosyl transferase, family
           2 - delta proteobacterium MLMS-1
          Length = 322

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = +2

Query: 146 RSDHVK*LCAVDIPRAGLAALPRLIAGAGLTPAAGRQGRRRETRLCQL 289
           R D +     V I R  +AAL +L+AG  LTPA     RR   R CQ+
Sbjct: 246 RPDQLSVRHRVGIDRYRIAALKKLLAGELLTPAQTTLVRRELARKCQI 293


>UniRef50_UPI0000E1EC71 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 342

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 21/55 (38%), Positives = 24/55 (43%)
 Frame = +2

Query: 224 GAGLTPAAGRQGRRRETRLCQLGP*DRRDPRGNGFKISQKILFPCSRIPERSEAP 388
           G GL  A  R+ RR E R  Q    DR  PR NG         PC+R   R+  P
Sbjct: 113 GRGLPAANPRRPRREEPRAAQ----DRVPPRSNGTSAGAGDRCPCARTSGRNLCP 163


>UniRef50_Q08MH1 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 529

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 24/62 (38%), Positives = 28/62 (45%)
 Frame = +2

Query: 107 SGGWWVYRKATDARSDHVK*LCAVDIPRAGLAALPRLIAGAGLTPAAGRQGRRRETRLCQ 286
           +GGW        AR    +  C  D P    AA      G+ L PAAGR GRRR+    Q
Sbjct: 64  AGGWGRSTGCPTARPMSGRMSCRRDTPSG--AATHERSGGSALPPAAGR-GRRRQDAGRQ 120

Query: 287 LG 292
           LG
Sbjct: 121 LG 122


>UniRef50_A2VSU2 Cluster: NAD/NADP transhydrogenase beta subunit;
           n=1; Burkholderia cenocepacia PC184|Rep: NAD/NADP
           transhydrogenase beta subunit - Burkholderia cenocepacia
           PC184
          Length = 494

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 170 CAVDIPRAGLAAL--PRLIAGAGLTPAAGRQGRRRETR 277
           C +   RAGL A   PR     G    AGR+G RRE R
Sbjct: 336 CGIGRDRAGLRACRRPRAARAEGADRQAGREGHRREVR 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,087,824
Number of Sequences: 1657284
Number of extensions: 5977974
Number of successful extensions: 19242
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19237
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)