Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P15
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   4.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   4.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   8.0  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 179 DIPRAGLAALPRLI 220
           DI + GL +LPRL+
Sbjct: 217 DIKKKGLHSLPRLV 230


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 397 PPPRRFTPLGDAAARK 350
           PP  R TP  DA++++
Sbjct: 104 PPEERLTPSKDASSKR 119


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 25  TETTPRDLLRSMKNSDTS 78
           TE   RD++R  KNSD +
Sbjct: 47  TEGDCRDVVRCDKNSDNN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,007
Number of Sequences: 336
Number of extensions: 1220
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)