Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P14
(542 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 37 0.002
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 32 0.063
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 0.34
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 29 0.34
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 28 0.77
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 0.77
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 28 1.0
SPAC222.03c |tim10||Tim9-Tim10 complex subunit Tim10|Schizosacch... 27 1.8
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 2.4
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.1
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 26 3.1
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 4.1
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 26 4.1
SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr 1||... 25 5.5
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 25 7.2
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 25 7.2
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 25 7.2
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 25 7.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 7.2
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 25 9.5
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 9.5
SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2 |... 25 9.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 37.1 bits (82), Expect = 0.002
Identities = 27/97 (27%), Positives = 37/97 (38%)
Frame = +3
Query: 246 CIICNKKFINPKALRIHAAKTHKLKINNPNKKAYKYKLRVCDICGKEFRDSPTFYRHKNR 425
C IC ++F LR H H+ + +K Y + C K F S +H +
Sbjct: 206 CSICGRQFKTAAHLRHHVV-LHQTTLEE--RKTYHCPMEGCK---KSFTRSSALKKHISV 259
Query: 426 HKEENTLFKCDICAIIFTSESKLNMHMTTHTGKTVKK 536
E N F CD C F + L H+ T K K
Sbjct: 260 IHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 31.9 bits (69), Expect = 0.063
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +3
Query: 213 IENKFDIENSFCIICNKKFINPKALRIHAAKTHKLKINNPNKKAYKYKLR---VCDI--C 377
IEN N + + N + P++ +++ +K + ++ +K + K + VC C
Sbjct: 521 IENDNSKSNDYLSVRNTR---PRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGC 577
Query: 378 GKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSESKLNMHMTTHTG 521
K F + H N H F+C IC F + H HTG
Sbjct: 578 NKRFTRAYNLKSHMNTHTNYRP-FQCSICKKSFARQHDKRRHEQLHTG 624
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 29.5 bits (63), Expect = 0.34
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 363 VCDICGKEFRDSPTFYRH-KNRHKEENTLFKCDICAIIFTSESKLNMHMTTH 515
VC C K+F+ S RH ++ H E F C IC F+ L H H
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKP-FVC-ICGKRFSRRDNLRQHERLH 473
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 29.5 bits (63), Expect = 0.34
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 312 KLKINNPNKKAYKYKLRVCDICGKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSESK 491
K K+ P+ K ++ CD C K F RHK H + + C C I +
Sbjct: 16 KRKLTEPSLIDSK-RVFPCDQCAKRFTRHENLTRHKACHSKAEPI-PCPYCEIKCKRKDL 73
Query: 492 LNMHMTT-HTGKTV 530
L H+ H K+V
Sbjct: 74 LKRHIQRFHNDKSV 87
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 246 CIICNKKFINPKALRIHA-AKTHKLKINNPNKKAYKY 353
C++CNK F + L H +K HK + N++ K+
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEIKKH 308
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 363 VCDICGKEFRDSPTFYRHKNRHKEENTLFK 452
+C +C K FR H+N K + L K
Sbjct: 271 MCMVCNKNFRSQNQLENHENSKKHKKNLRK 300
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 0.77
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 438 NTLFKCDICAIIFTSESKLNMHMTT-HTGKTV 530
N F+CD C ++F +S L H T H +TV
Sbjct: 136 NATFRCDKCDMMFVKQSGLTNHKRTYHQVETV 167
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 375 CGKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSESKLNMHM 506
C K F RH+ H E F C C F LN H+
Sbjct: 33 CPKSFTRKEHLRRHERTH-ENVKAFSCSFCNRAFARSDVLNRHV 75
>SPAC222.03c |tim10||Tim9-Tim10 complex subunit
Tim10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 213 IENKFDIENSFCIICNKKFINPKALRIHAAKTHKLKINNPNKKAYKYKLRVCDICGKEFR 392
+E DI N + C+KK I+PK K + I+ K ++ + K +
Sbjct: 25 VEMMSDIFNRLVMTCHKKCISPKYYEADLTKGESVCIDRCVSKYFEANQSLSQHMQKRGQ 84
Query: 393 DSPT 404
++PT
Sbjct: 85 ENPT 88
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 327 NPNKKAYKYKLRVCDICGKEFRDSPTFYRHKNRHKEENTLFKC 455
+PN K K VC+ C + F RH H E F C
Sbjct: 59 DPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKP-FTC 100
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 366 CDI--CGKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSESKLNMHM 506
CD C K F RH H F C C+ FT LN H+
Sbjct: 19 CDFQGCTKSFTRKEHARRHFRSHTNSKA-FICPHCSSSFTRSDVLNRHV 66
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 438 NTLFKCDICAIIFTSESKLNMHMTTHTGK 524
N ++C C F+ S L +H +HTG+
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIHTYSHTGE 493
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 246 CIICNKKFINPKALRIH-AAKTHKLKINNPNKKAYKYKLR 362
C +CNKKF + A H A+K H+ ++ + + KL+
Sbjct: 72 CEVCNKKFYSEGAYSSHMASKKHRDNLSKFQRNSRIKKLQ 111
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 PKALRIHAAKTHKLKINNPN--KKAYKYKLRVCDICGKEFRDSPTFYRHKNRHKEENTLF 449
P + + A K ++ N KKA Y+ C++C K+F + H K + L
Sbjct: 42 PLSAEVFAGKILSIQKQNEEVQKKAEFYQN--CEVCNKKFYSEGAYSSHMASKKHRDNLS 99
Query: 450 K 452
K
Sbjct: 100 K 100
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 255 CNKKFINPKALRIHAAKTHKLKINNPNKKA---YKYKLRVC 368
C K F+ P+ +R H K HK +++ K A Y Y L C
Sbjct: 481 CAKLFLGPEFVRKHINKKHKDWLDHIKKVAICLYGYVLDPC 521
>SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 467
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 88 MSPTASSNFSMNCPTLFLPIELLVN 14
+ P+A+S+FS N T F+P+ L N
Sbjct: 163 LDPSANSSFSFNMETEFVPLIGLEN 187
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 447 FKCDICAIIFTSESKLNMHMTTHTGK 524
+KC +C F H+ THTG+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGE 51
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 103 FSLKSMSPTASSNFSMNCPTLFLPIELLVNPFLV 2
F L+S S + ++ P+ +P+ LLV P ++
Sbjct: 20 FKLRSFSTKSLNDTKEKAPSALIPVGLLVKPTML 53
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +3
Query: 321 INNPNKKAYKYKLRVCDICGKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSES 488
+++ K +Y+ K R+ + + +YR K++ LF +IC ++T+ S
Sbjct: 487 VHSSKKVSYETKYRIERLVNAALKP---YYREAKISKDQFALFNKNICRSVYTALS 539
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 207 TDLISLSFLYILYRRHLHNYSLHQYTFGVH 118
T +I+L L LY+ HL Y Y +H
Sbjct: 161 TGIIALDILDYLYKNHLEVYGRTTYNIVLH 190
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 293 YSQCFRINEFLIANYAE*IFNIKFVLN 213
Y CF ++ FL NY E + I+++++
Sbjct: 146 YRLCFTLSAFLSGNYKESLEQIQYLIS 172
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/47 (23%), Positives = 16/47 (34%)
Frame = +3
Query: 375 CGKEFRDSPTFYRHKNRHKEENTLFKCDICAIIFTSESKLNMHMTTH 515
C K H H + ++CD+C F L H+ H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRP-YRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 213 IENKFDIENSFCIICNKKF 269
+ N FD + C CNKKF
Sbjct: 127 MRNDFDSKGYVCPFCNKKF 145
>SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 475 NIIAQMSHLNKVFSSLCRFLCL*NVGE 395
NI A SH KV++ +C + N+GE
Sbjct: 70 NICANGSHEAKVYNEICASMSGLNIGE 96
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,002,965
Number of Sequences: 5004
Number of extensions: 38367
Number of successful extensions: 145
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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