Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P13
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 282 5e-75
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 209 4e-53
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 165 7e-40
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 156 4e-37
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 147 2e-34
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 146 4e-34
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 137 2e-31
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 114 2e-24
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 107 3e-22
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 106 4e-22
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 103 3e-21
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 101 2e-20
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 101 2e-20
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 97 4e-19
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 91 2e-17
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 84 2e-15
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 84 3e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 69 9e-11
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 63 4e-09
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 62 8e-09
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 62 1e-08
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 58 2e-07
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 54 2e-06
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 52 1e-05
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 44 0.002
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 44 0.003
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 43 0.005
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 42 0.009
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 1.7
UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC... 33 5.3
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 33 7.0
UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5; Alphaprote... 32 9.3
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 282 bits (691), Expect = 5e-75
Identities = 137/195 (70%), Positives = 148/195 (75%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
KQIGGEKNGGTRTV LK RKSFYPTQ+KIR S G+ FSKHVRR RPNL GTVCILLAG
Sbjct: 74 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 133
Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
RHAGKR TGPFAFN+CPLRRIPQRYVIGTST++ LG+FKLP H +D
Sbjct: 134 RHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 193
Query: 369 YFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLR 548
YF +G+DIFATKKEKYVPSEQRK DQK VDEAVIKAI RPDKK LR
Sbjct: 194 YFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLR 253
Query: 549 GYLMASFGLRSSQFP 593
GYL A+FGLRSSQ+P
Sbjct: 254 GYLKAAFGLRSSQYP 268
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 209 bits (510), Expect = 4e-53
Identities = 107/196 (54%), Positives = 128/196 (65%), Gaps = 1/196 (0%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
K+IGG KNGG RTV LK K+ YPT+ +++R +FS+H R TR NLTPGTV ILLAG
Sbjct: 66 KKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAG 125
Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
RH GKR TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DA
Sbjct: 126 RHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDA 185
Query: 369 YFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTL 545
YF GE DIFA KKE++VP+EQRK DQK VD A++K I+ P+ K
Sbjct: 186 YF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241
Query: 546 RGYLMASFGLRSSQFP 593
YL F L SSQ+P
Sbjct: 242 AKYLQNMFALHSSQYP 257
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 165 bits (401), Expect = 7e-40
Identities = 88/197 (44%), Positives = 116/197 (58%), Gaps = 2/197 (1%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRR-SHGKS-FSKHVRRTRPNLTPGTVCILL 182
K +GG+KNGGTR V L+ +YPT+D R+ SHGK FS+HVR+ R ++TPGT+ I+L
Sbjct: 94 KPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIIL 153
Query: 183 AGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLD 362
GRH GKR TGP N PLRR Q++VI TSTK+D+ + K+P HL
Sbjct: 154 TGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLT 213
Query: 363 DAYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKT 542
DAYF Q +IF T+KEKY +EQRK DQK VD ++ I+ P
Sbjct: 214 DAYF----KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ--- 266
Query: 543 LRGYLMASFGLRSSQFP 593
L+GYL + F L + +P
Sbjct: 267 LQGYLRSVFALTNGIYP 283
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 156 bits (378), Expect = 4e-37
Identities = 88/199 (44%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Frame = +3
Query: 3 TRKQIGGEKNGGTRTVLLKSRKSFYPTQD--KIRRRSHGKSFSKHVRRTRPNLTPGTVCI 176
T K++ GEKNGG R + LK + YPT+D + +R SH K S+ R +TPGTV I
Sbjct: 68 TVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLI 127
Query: 177 LLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAH 356
LLAG H GKR TGP+ N CPLRRI Q YVI TSTK+DL KLP
Sbjct: 128 LLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEG 187
Query: 357 LDDAYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDK 536
LDD YF +GE IF K +++V SE+ K Q VD+ V++A++ P+K
Sbjct: 188 LDDRYF--KRNKGPKRGRKDEGE-IFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEK 244
Query: 537 KTLRGYLMASFGLRSSQFP 593
K L YL A+F LR+ +P
Sbjct: 245 KMLLHYLAATFSLRNRMYP 263
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 147 bits (356), Expect = 2e-34
Identities = 85/197 (43%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
K IGG+KNGG R V ++ +YPT+D RR ++ K + + R ++TPGTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPTEDVRRRLANRKK--PGMAKLRSSITPGTVLILLAG 111
Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAH--LD 362
H GKR TGPF N PLRRIPQ YVI TST +D+ D KLP H D
Sbjct: 112 AHRGKRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFAD 171
Query: 363 DAYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKT 542
++YF + ED+F E+ PSEQR ADQK VD+ ++ I P+ K
Sbjct: 172 ESYF------KGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPNMKK 225
Query: 543 LRGYLMASFGLRSSQFP 593
YL + F LR QFP
Sbjct: 226 ---YLSSLFSLRKGQFP 239
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 146 bits (354), Expect = 4e-34
Identities = 78/195 (40%), Positives = 110/195 (56%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
K+IGG+KNGGTR V + FYP + +R +K+ + R +L PGT+ ILLAG
Sbjct: 47 KKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAG 106
Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
+ GKR +GP N PLRR+ Q+ VI TST++D+ + K+P H++D
Sbjct: 107 VNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHINDT 166
Query: 369 YFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLR 548
YF +G DIFA+K E+Y P+EQRK DQ VD ++KAI+ +PD L
Sbjct: 167 YF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLV 221
Query: 549 GYLMASFGLRSSQFP 593
YL FGL+++ P
Sbjct: 222 KYLRTIFGLKNNMIP 236
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 137 bits (331), Expect = 2e-31
Identities = 78/196 (39%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Frame = +3
Query: 21 GEKNGGTRTVLLKSRKSF---YPTQDKIR--RRSHGKSFSKHVRRTRPNLTPGTVCILLA 185
G + T+ L+K + F Y TQ R R K FS HVR+ R ++ PGTV ILLA
Sbjct: 42 GLRTPKTKEALVKPKTRFPRSYVTQQGKRKLRLRRAKCFSNHVRKIRSSIQPGTVLILLA 101
Query: 186 GRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDD 365
G H GKR TGPF +N PLRR+ Q YVI TST++D+ F +P H+DD
Sbjct: 102 GPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDD 161
Query: 366 AYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTL 545
YF +F+T+ +KY S+ RK DQKLVD + AI+ PD K L
Sbjct: 162 EYF----RRVDLKESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKIL 217
Query: 546 RGYLMASFGLRSSQFP 593
YL + F L +P
Sbjct: 218 HAYLRSLFSLGKRDYP 233
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 114 bits (274), Expect = 2e-24
Identities = 65/151 (43%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Frame = +3
Query: 144 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 320
R LTPGTV I+LAGRH GKR TGP N PLRRI Q +VI TS
Sbjct: 68 RKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSL 127
Query: 321 KVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDE 500
KV++ K+P H++D YF G++IFA+ K +Y SEQRK D K VD
Sbjct: 128 KVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVDA 181
Query: 501 AVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
++ AI+ P+ K L GYL F L +Q+P
Sbjct: 182 PILAAIKKHPEHKFLFGYLGTRFSLGKNQYP 212
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 107 bits (256), Expect = 3e-22
Identities = 69/186 (37%), Positives = 93/186 (50%)
Frame = +3
Query: 36 GTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXX 215
G R + K+ K F P+ R + K + V R ++TPGTV I+LAGR AGKR
Sbjct: 54 GKRVIAAKASK-FAPSIPAEIRSTAAKKVQQKVA-LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 216 XXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXX 395
TGPF N PLRRI QRYVI TSTK+D+ K+ A ++DAYF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 396 XXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGL 575
++ K EK ++ R ADQK VD A++ ++ +K L YL F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVLK---KEKFLTVYLKTKFYL 225
Query: 576 RSSQFP 593
+ +FP
Sbjct: 226 KKGEFP 231
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 106 bits (255), Expect = 4e-22
Identities = 70/174 (40%), Positives = 89/174 (51%)
Frame = +3
Query: 72 FYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 251
FYP +D +++ + +K + R ++TPGTV I+LAGR GKR T
Sbjct: 64 FYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVT 121
Query: 252 GPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGEDI 431
GPF N PLRR+ Q YVIGTSTKVD+ L DD YF +GE
Sbjct: 122 GPFKINGVPLRRVNQAYVIGTSTKVDISGVTLD-KFDDKYF---GKVAEKKKKKTEGEFF 177
Query: 432 FATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
A K+EK + +K DQK VD A+IKAI P+ KT YL A F L+ P
Sbjct: 178 EAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKT---YLGARFSLKQGMKP 228
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 103 bits (247), Expect = 3e-21
Identities = 76/181 (41%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Frame = +3
Query: 60 SRKSFYPTQD-KIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 236
S FYP D K R+ S K + + R ++TPGTV ILLAGR GKR
Sbjct: 49 SAPKFYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
Query: 237 XXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXX 416
TGPF N P+RR+ Q YVI TSTKVD+ + DD YF
Sbjct: 106 LLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNV-EKFDDKYF---SRDKKQKAKKT 161
Query: 417 QGEDIFATKKE--KYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQF 590
+GE +F T+KE K +P E +K DQK+VD +IKAI PD KT YL A F LR
Sbjct: 162 EGE-LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPDLKT---YLGARFSLRDGDK 216
Query: 591 P 593
P
Sbjct: 217 P 217
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 101 bits (241), Expect = 2e-20
Identities = 67/196 (34%), Positives = 88/196 (44%)
Frame = +3
Query: 6 RKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLA 185
+K IGG KNGG R V K +YP DK K+ K + RP++ GT+ ILLA
Sbjct: 24 KKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLA 82
Query: 186 GRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDD 365
G G R TGP+A N PL R+ QRYVI TST +D+ + +D+
Sbjct: 83 GVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-KKIDN 141
Query: 366 AYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTL 545
AYF D ++K E R ADQK +D ++ I P L
Sbjct: 142 AYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP---LL 195
Query: 546 RGYLMASFGLRSSQFP 593
YL F L+ Q+P
Sbjct: 196 SSYLKVKFSLKKGQYP 211
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 101 bits (241), Expect = 2e-20
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 299
F+ H RR R ++TPG V ILLAGRH KR TGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 300 YVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKA 479
YVI T T++ + + K+P+ L+D +F + IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 480 DQKLVDEAVIKA 515
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/116 (41%), Positives = 69/116 (59%)
Frame = +3
Query: 246 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE 425
F GPF+ N P+RRI Q++V+ TSTK+D+ K+PA + D YF + +
Sbjct: 13 FLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------EKK 66
Query: 426 DIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
DIF K++Y ++ RKADQK +D AV+ +I+ D K L GYL +FGL Q+P
Sbjct: 67 DIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYP 122
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 91.1 bits (216), Expect = 2e-17
Identities = 72/205 (35%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Frame = +3
Query: 9 KQIGGEKN--GGTRTVLLKSRKS--FYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCI 176
K +G K G R + S+K+ +YP D+ + + K+ H + RP+L PGT+ I
Sbjct: 8 KSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARKT--AHPTKLRPSLQPGTILI 65
Query: 177 LLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLG--DFK-L 347
LLAGR GKR TGPF N PLRR+ RYVI TS+ VDL D K L
Sbjct: 66 LLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVDQKTL 125
Query: 348 PAHLDDAYFXXXXXXXXXXXXXXQGEDIF---ATKKEKYVPSEQRKADQKLVDEAVIKAI 518
YF +GE+ F K EK + R ADQK +D+A++ I
Sbjct: 126 EKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQALLATI 179
Query: 519 RLRPDKKTLRGYLMASFGLRSSQFP 593
+ P L YL ++F LR+ P
Sbjct: 180 KKEP---FLGSYLASTFSLRTGDKP 201
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 84.2 bits (199), Expect = 2e-15
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Frame = +3
Query: 96 RRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNAC 275
R+ S + S + R +L PG VCILLAG + GKR TGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 276 PLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAY-FXXXXXXXXXXXXXXQGEDIFATKKEK 452
P+RR+ Y+I TSTKVD+ + D+ + QGE+ TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSKFTDEYFKVDRSKLKKSKDAFMDQGEE---TKVNR 136
Query: 453 YVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
V SE+RK Q+ +D ++I +I+ P + YL F L S FP
Sbjct: 137 VV-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFP 179
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 83.8 bits (198), Expect = 3e-15
Identities = 59/174 (33%), Positives = 86/174 (49%)
Frame = +3
Query: 72 FYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 251
+YP++D + K+ ++ R +L PGTV ILLAGR GKR +
Sbjct: 9 WYPSEDVAALKKTRKA--ARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 252 GPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGEDI 431
GPF N PLRR+ RYVI TSTKV + + + YF + ++
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTKVSVEGVNV-EKFNVEYF----AKEKLTKKEKKEANL 121
Query: 432 FATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
F ++ K + +E R DQK+VD+A+I I+ P L+ YL ASF L++ P
Sbjct: 122 FPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKP 171
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 68.9 bits (161), Expect = 9e-11
Identities = 63/173 (36%), Positives = 72/173 (41%), Gaps = 23/173 (13%)
Frame = +3
Query: 144 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 323
R L PGTV ILLAGR GKR TGPF N PLRR+ RYVI TS K
Sbjct: 36 RSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQK 95
Query: 324 VDLG---DFKLPAHLDDAYF--XXXXXXXXXXXXXXQGE------------------DIF 434
VDL + K+ YF QGE DI
Sbjct: 96 VDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNSELEHGAHNADIV 155
Query: 435 ATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
KKE S R ADQK +D+A+I I+ + L YL +SF LR P
Sbjct: 156 MQKKE---VSSSRVADQKAIDKALIANIK---KVEFLASYLASSFTLRKGDKP 202
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/75 (45%), Positives = 39/75 (52%)
Frame = +3
Query: 150 NLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVD 329
++TP TV I+L GRH GKR TGP A N PL R+ Q VI T TKVD
Sbjct: 8 SITPQTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVD 67
Query: 330 LGDFKLPAHLDDAYF 374
+ K HL DA F
Sbjct: 68 ICKVKTSKHLTDASF 82
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 62.5 bits (145), Expect = 8e-09
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +3
Query: 111 GKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRI 290
G+ ++ V + R +L PG V ILL G + GKR TGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 291 PQRYVIGTSTKV 326
RYVI TST V
Sbjct: 90 NSRYVIATSTNV 101
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 62.1 bits (144), Expect = 1e-08
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Frame = +3
Query: 141 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 320
T + PG V ILL+GR GKR TGPF N PL+R+ YVI TST
Sbjct: 54 TLRKIVPGQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTST 113
Query: 321 KVDLGDFKLPAHLDDAYF---XXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKL 491
KVD+ ++D YF +GE + + + ++ QK
Sbjct: 114 KVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQTAEKTRLDGKRNTQKS 172
Query: 492 VDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
VD A+I AI+ + L+ YL A F + + P
Sbjct: 173 VDAALITAIK---KTQLLKQYLGARFTIGKTTRP 203
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 58.0 bits (134), Expect = 2e-07
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 11/161 (6%)
Frame = +3
Query: 144 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 320
R + PG + I+LAGR G+R +GP +N P+RRI RYVI TST
Sbjct: 30 RKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATST 89
Query: 321 KVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGED-----IFATKK-----EKYVPSEQ 470
VD+ + + G+ A KK +K + S+
Sbjct: 90 TVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSDA 149
Query: 471 RKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
R QK +D A+I AI+ K GYL + F ++ P
Sbjct: 150 RAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAP 190
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +3
Query: 18 GGEKNGGTRTVLLKSRKSFYPTQDK--IRRRSHGKSFS---KHV--RRTRPNLTPGTVCI 176
G +KN V+ +K P + K I ++ +G+ + K V R+ R ++ G V I
Sbjct: 22 GDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQVGKVAI 81
Query: 177 LLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKV 326
+L G+H GKR GP+ N PL+R+ RY+I TST +
Sbjct: 82 ILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 51.6 bits (118), Expect = 1e-05
Identities = 51/172 (29%), Positives = 75/172 (43%)
Frame = +3
Query: 9 KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
K + G+KNGGT V L+ K + + + +F KH + N TP TV I++ G
Sbjct: 91 KTVSGDKNGGTGVVKLQKMKMYL---GSCKAMAKSPAF-KH-EKAVCNSTPETVLIIITG 145
Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
+H +R TGP A N L R Q+ V+ TST ++ D
Sbjct: 146 QH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINT--------QTDV 195
Query: 369 YFXXXXXXXXXXXXXXQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIRL 524
YF QG+ IF +K+KY +Q KAD K +D ++ +L
Sbjct: 196 YF---KMKQLHKPRHQQGK-IFDMEKDKY-GIKQCKADHKTLDSQILPKRKL 242
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 249 TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 374
TG F N PLRR+ Q YVI TSTKVD+ + DD YF
Sbjct: 172 TGSFKINGVPLRRVNQAYVIATSTKVDIPKVNV-EKFDDKYF 212
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 444 KEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSSQFP 593
KEKY +EQRK DQK VD ++ ++ P LRGYL +SF L +P
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYP 49
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +3
Query: 141 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 320
TRP+L GTV I++ G H GKR GP P+ I Q Y+I TST
Sbjct: 52 TRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP----VVPVNEISQDYLIATST 107
Query: 321 KVDLGDFKLPAHLDDA 368
+++ A ++ A
Sbjct: 108 SIEVAANATEAQVEAA 123
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 42.3 bits (95), Expect = 0.009
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +3
Query: 132 VRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIG 311
VRRT +L G V ++L G A +R GP + N PL RI +RY++
Sbjct: 22 VRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLA 79
Query: 312 TSTKVDL 332
TST +DL
Sbjct: 80 TSTVLDL 86
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 141 TRPNLTPGTVCILLAGRHAGKR 206
++P + PG VCI+L GRHAGK+
Sbjct: 2 SQPIIKPGLVCIVLQGRHAGKK 23
>UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33232-PC, isoform C - Tribolium castaneum
Length = 2178
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 374 KVGIVKMRR*LEIAQVYLSR-CSNDIALRNPAQGTRVESKRSSEE*QTTRQHSNE 213
K GI+K RR L+ +QV R CS D+A + P + ++++R S + TR S E
Sbjct: 392 KQGILKKRRSLDESQVMRHRSCSPDVANKAPDSRSILKNQRRSSMEELTRTQSPE 446
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 32.7 bits (71), Expect = 7.0
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 72 FYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGR 191
FYP D +++ K +K ++ R ++TPGTV I+LAGR
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR 244
>UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5;
Alphaproteobacteria|Rep: Cytochrome c, monohaem -
Methylobacterium sp. 4-46
Length = 620
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 491 GRRGRDKGDQTPARQEDTPRLPHGLVRAPIESVPGRLR 604
GR G +GD PAR+ PR PH P+ +P RLR
Sbjct: 172 GRSGPARGDGAPARRPGRPRGPH-----PLAGLPHRLR 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,703,233
Number of Sequences: 1657284
Number of extensions: 10796927
Number of successful extensions: 31870
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 30737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31845
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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