Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P13
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   209   3e-54
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   209   3e-54
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   186   3e-47
BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p pro...    31   1.2  
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    29   5.0  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  209 bits (510), Expect = 3e-54
 Identities = 107/196 (54%), Positives = 128/196 (65%), Gaps = 1/196 (0%)
 Frame = +3

Query: 9   KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
           K+IGG KNGG RTV LK  K+ YPT+  +++R    +FS+H R TR NLTPGTV ILLAG
Sbjct: 66  KKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAG 125

Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
           RH GKR              TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DA
Sbjct: 126 RHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDA 185

Query: 369 YFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTL 545
           YF               GE DIFA KKE++VP+EQRK DQK VD A++K I+  P+ K  
Sbjct: 186 YF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241

Query: 546 RGYLMASFGLRSSQFP 593
             YL   F L SSQ+P
Sbjct: 242 AKYLQNMFALHSSQYP 257


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  209 bits (510), Expect = 3e-54
 Identities = 107/196 (54%), Positives = 128/196 (65%), Gaps = 1/196 (0%)
 Frame = +3

Query: 9   KQIGGEKNGGTRTVLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAG 188
           K+IGG KNGG RTV LK  K+ YPT+  +++R    +FS+H R TR NLTPGTV ILLAG
Sbjct: 66  KKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAG 125

Query: 189 RHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDA 368
           RH GKR              TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DA
Sbjct: 126 RHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDA 185

Query: 369 YFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTL 545
           YF               GE DIFA KKE++VP+EQRK DQK VD A++K I+  P+ K  
Sbjct: 186 YF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241

Query: 546 RGYLMASFGLRSSQFP 593
             YL   F L SSQ+P
Sbjct: 242 AKYLQNMFALHSSQYP 257


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  186 bits (452), Expect = 3e-47
 Identities = 96/183 (52%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
 Frame = +3

Query: 48  VLLKSRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXX 227
           V +K  K+ YPT+  +++R    +FS+H R TR NLTPGTV ILLAGRH GKR       
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119

Query: 228 XXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXX 407
                  TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF           
Sbjct: 120 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKK 175

Query: 408 XXXQGE-DIFATKKEKYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLMASFGLRSS 584
               GE DIFA KKE++VP+EQRK DQK VD A++K I+  P+ K    YL   F L SS
Sbjct: 176 DKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSS 235

Query: 585 QFP 593
           Q+P
Sbjct: 236 QYP 238


>BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p
           protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 227 QHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAMRTTPDLVLS 81
           +H NEH  +   + R+ N++ +  +VRS P  +F        TPD  LS
Sbjct: 323 RHVNEHQGVLPFTKRKYNSYTS-LQVRSTPMPIFNHPNGFANTPDAFLS 370


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -3

Query: 298 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 161
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,157,984
Number of Sequences: 53049
Number of extensions: 514918
Number of successful extensions: 1500
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)