Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P12
(544 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05) 85 5e-17
SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16
SB_44570| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_5360| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 70 1e-12
SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11) 70 1e-12
SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3) 51 7e-07
SB_43980| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_16634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_45653| Best HMM Match : zf-GRF (HMM E-Value=5.3e-16) 27 7.5
SB_34204| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 27 7.5
SB_24032| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12) 27 9.9
>SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05)
Length = 261
Score = 84.6 bits (200), Expect = 5e-17
Identities = 41/121 (33%), Positives = 63/121 (52%)
Frame = +3
Query: 12 NCLLFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELK 191
N LFITHGG S E GVP++ P+F+DQF ++ G V L + A E+
Sbjct: 99 NVKLFITHGGANSVYEGCGHGVPLLVTPLFSDQFGYGEKVKAAGLGISVSLKESTAEEMI 158
Query: 192 AAIQDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWY 371
I +++ P Y+E +S + D+P P E W+++V++ G HLR +P+Y
Sbjct: 159 KNINELIEKPCYKENALRVSRLMEDKPQTPQQEGAFWIEYVIRNNGTQHLRPSGRDLPFY 218
Query: 372 Q 374
Q
Sbjct: 219 Q 219
>SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 80.6 bits (190), Expect = 8e-16
Identities = 35/118 (29%), Positives = 66/118 (55%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
+ ++H G S E+ + G+P++G+P+ ADQF N A ++G VD++ A +L I
Sbjct: 251 VLVSHLGQNSLYESSYHGIPLVGVPLCADQFDNAVLAEDRGLGLSVDINTVTADQLYRTI 310
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
+ ++ +PR++E +S + DR P E W+++ ++ R HL ++ + WYQ
Sbjct: 311 RRVVDEPRFKENAARISRLMQDRRRSPTEEAADWIEYTLRHRRLTHLCPASVHLTWYQ 368
>SB_44570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/118 (30%), Positives = 64/118 (54%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
+F++H G S EA + G+P++G+P+F DQ N +KG VD+ A +L I
Sbjct: 530 VFVSHLGQNSLYEAGYHGIPLVGVPLFGDQPDNAVLVEDKGLGLAVDIHTVTADKLYRTI 589
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
+ ++ +PR++E +S + DR P E W+++ ++ HLR ++ + WYQ
Sbjct: 590 RRVIDEPRFKENAVRISRLMQDRRRSPTEEAADWIEYTLRHGRLTHLRPASIHLTWYQ 647
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
+F++H G S EA + G+P++G+P+F DQ N +KG VD+ A EL I
Sbjct: 125 VFVSHLGQNSLYEAGYHGIPLVGVPLFGDQSENAVLVEDKGLGLAVDIHTVTADELYRTI 184
Query: 201 QDILTDPRYRE 233
+ ++ +PR RE
Sbjct: 185 RRVIDEPRPRE 195
>SB_5360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/118 (30%), Positives = 64/118 (54%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
LF++H G S E+ + G+P++G+P++ DQF N +KG VD+ A E AI
Sbjct: 318 LFVSHLGQNSLYESGYRGIPLVGVPLWGDQFDNAVLVKDKGLGLVVDIHTVTADEFYRAI 377
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
+ ++ +P ++E +S + DR P E W+++ ++ HLR ++ + WYQ
Sbjct: 378 RRVIDEPGFKENAARISRLMRDRRRSPTQEAADWIEYTLRHGNLTHLRPASVHLTWYQ 435
>SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 78.2 bits (184), Expect = 4e-15
Identities = 35/118 (29%), Positives = 63/118 (53%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
+F++H GL S E+ + G+P++G+P++ DQ N KG VD+ A EL I
Sbjct: 397 VFVSHLGLNSLYESGYHGIPVVGVPIYGDQPDNAVLMEEKGLGLAVDIHTVTADELYRTI 456
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
+ ++ + R++E +S + DR P E W+++ ++ HLR ++ + WYQ
Sbjct: 457 RRVIDEKRFKENAARISRLMQDRKRSPTEEGADWIEYTLRHGRLTHLRPASVHLSWYQ 514
>SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/121 (33%), Positives = 59/121 (48%)
Frame = +3
Query: 12 NCLLFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELK 191
N LFI HGG E + GVP++ P FADQ N + N G + V ++ A EL
Sbjct: 376 NTKLFINHGGANGMAETAYHGVPVVCSPFFADQPDNSNLLKNAGMGEIVRVNTATAEELV 435
Query: 192 AAIQDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWY 371
+ ++ D Y+ +S RP P E +V++V+ PHL+ +L MP+Y
Sbjct: 436 RVVTKVINDDSYKTNGARVSRAMKSRPREPVKEAADFVEYVLAQGHLPHLKPRSLAMPFY 495
Query: 372 Q 374
Q
Sbjct: 496 Q 496
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 69.7 bits (163), Expect = 1e-12
Identities = 41/118 (34%), Positives = 58/118 (49%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
LFITH G E+ + GVP+I +P+F D N A + G A+ V LS A +L + +
Sbjct: 135 LFITHAGANGLAESAYHGVPMICVPLFGDHNQNAQVAKDVGIAEVVMLSDITADQLFSVM 194
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
Q +L RY E +S + RP P E V++V HLR +P+YQ
Sbjct: 195 QAVLKGKRYHENSARVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQ 252
>SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11)
Length = 385
Score = 69.7 bits (163), Expect = 1e-12
Identities = 41/118 (34%), Positives = 58/118 (49%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
LFITH G E+ + GVP+I +P+F D N A + G A+ V LS A +L + +
Sbjct: 225 LFITHAGANGLAESAYHGVPMICVPLFGDHNQNAQVAKDVGIAEVVMLSDITADQLFSVM 284
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
Q +L RY E +S + RP P E V++V HLR +P+YQ
Sbjct: 285 QAVLKGKRYHENSARVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQ 342
>SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/118 (28%), Positives = 60/118 (50%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
LFITH G EA + GVP++ +P+F DQ N + G +D++ + ++ +A+
Sbjct: 494 LFITHAGAHGMAEAGYHGVPVVAMPIFTDQPDNARMLSDVGMGVVLDINTATSEDVISAV 553
Query: 201 QDILTDPRYREKVNELSMIYHDRPVHPGSELVHWVQHVVKTRGAPHLRSPALIMPWYQ 374
+++T+PR +S I R P E V++V+ HL+ + MP+Y+
Sbjct: 554 TEVITNPRL--NAARVSHILKSRQRAPVEEAADHVEYVLAAGHVTHLKPRSQSMPFYR 609
>SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3)
Length = 157
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
LFITH G E+ + GVP+I +P+F DQF N A + G A+ + ++ A + + +
Sbjct: 90 LFITHAGANGLAESAYHGVPMICVPIFGDQFDNSQLAKDIGIAEMIKVNDMTADQFVSTL 149
Query: 201 QDILT 215
Q +LT
Sbjct: 150 QRVLT 154
>SB_43980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 389 IQEHLLVPGHNKGRGT*MWRSTCFYNVLYPVHQLRSRMYWSVVVNHR*FVNLLPIP 222
+Q +LVP + R W + +V+ VHQL+S +Y V+ LLP+P
Sbjct: 97 VQNSILVPLLSNPRNHEQWPAVVSQDVMRHVHQLKSNVY--VIAGQVKGKTLLPLP 150
>SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 245 TIYDLPRPTSTSGIGVGALGTARCKNTWSATSTFPGPYYALVP 373
++ DLP P+ TSG G+ + W T GPY AL P
Sbjct: 150 SLQDLPSPSRTSG-----FGSLTFSDMWKNPLTLTGPYGALFP 187
>SB_16634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 9 PNCLLFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDR 128
P CL + HGG + AI VP I P DQ D+
Sbjct: 49 PKCLAVMHHGGSGTVASAIRASVPQIVCPFMFDQSYWADK 88
>SB_45653| Best HMM Match : zf-GRF (HMM E-Value=5.3e-16)
Length = 470
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 133 TALSTLTNWSAKTGIPIIGTPKCIASVVDNKP 38
T +TL N+ + +PKCI +V +KP
Sbjct: 336 TRQNTLLNFFGSKNVTKASSPKCIVDIVTDKP 367
>SB_34204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 5 EAELSPFHHSWWFIINHRGNTFWSTD 82
EA++ P + S F+ HRG T W TD
Sbjct: 28 EADVRP-NSSHVFLYRHRGKTIWRTD 52
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 149 CKTFVNSSVHVNKLVCEDWYTYNRYS 72
C T+ N S H N +W TYN +S
Sbjct: 370 CSTYNNWSTHNNWSTHNNWSTYNNWS 395
>SB_24032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 21 LFITHGGLLSTTEAIHFGVPIIGIPVFADQFVNVDRAVNKGFAKRVDLSYTMAVELKAAI 200
L + + T AI G + IPVF +FV+ G + V L + V + AAI
Sbjct: 233 LSVEEVNVTKTLFAIVLGFSVCWIPVFIIEFVDATFG-EHGLPRPVYLVHAFLVSISAAI 291
Query: 201 QDIL 212
I+
Sbjct: 292 NPII 295
>SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12)
Length = 1206
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 41 FIINHRGNTFWSTDYRYTSLRRPI 112
F++N T W+T YR LR P+
Sbjct: 1120 FLLNQVNITEWNTKYRLARLREPV 1143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,781,496
Number of Sequences: 59808
Number of extensions: 403239
Number of successful extensions: 914
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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