Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P12
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 333  PHLRSPALIMPWYQKMF 383
            P+LR+ A I+ W +K F
Sbjct: 1180 PYLRTAAAILTWNEKRF 1196


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 317 YNVLYPVHQLRSRMYWSVVVNHR 249
           YN  YP+    S+  W++   HR
Sbjct: 57  YNPRYPLPYSGSKCTWTITSYHR 79


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 356 YYALVPEDVPGSRCCNHHSYILSCNS 433
           +  +V EDV    CC     I++C +
Sbjct: 188 FKVVVVEDVDSVECCGALKNIVACGA 213


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 348 GNVDVALHVFLQRAVPSAPTPIPDVLVGRGKS 253
           GNV     VFL    P     + D++ G G+S
Sbjct: 357 GNVITPQGVFLSLYQPQGMNILGDLIEGTGRS 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,828
Number of Sequences: 438
Number of extensions: 3710
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)