Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P11
         (285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   1.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   1.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   1.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   4.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   5.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   7.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 274 FVFAYIKNLLNLSLVQLFKS 215
           F+FA   NL  L+ V +FKS
Sbjct: 82  FLFAIYTNLSILTTVTIFKS 101


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 125 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 226
           C+A      +I K   N CR C  +   ++G  K
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNK 107


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 125 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 226
           C+A      +I K   N CR C  +   ++G  K
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNK 107


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 147 CLFEQARHEREPC 109
           C  E   HEREPC
Sbjct: 78  CQREGFFHEREPC 90


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 193 PRVCA*YWI*KAGLS 237
           P+ CA Y++ ++GLS
Sbjct: 569 PKNCAAYYVCRSGLS 583


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 128 RACSNRHGLIRKYGLNIC 181
           R C+  HGL+    LNIC
Sbjct: 473 RKCN--HGLVYDLELNIC 488


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 189 HCLQIFKPYLRMRPCLFEQARHE---REPCPYLR 97
           H LQ ++    +RP L  +  HE    +  P+L+
Sbjct: 275 HLLQEYRCIFSLRPGLTHKYTHEIKLHDKTPFLK 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,021
Number of Sequences: 336
Number of extensions: 1459
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)