Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P10
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4T7K9 Cluster: Chromosome undetermined SCAF8088, whole...    33   4.1  
UniRef50_Q6UWG8 Cluster: RKQG3127; n=60; Euteleostomi|Rep: RKQG3...    33   5.5  
UniRef50_A7RJS9 Cluster: Predicted protein; n=4; Nematostella ve...    32   9.5  

>UniRef50_Q4T7K9 Cluster: Chromosome undetermined SCAF8088, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF8088, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 669

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 295 SYLKISHVMLNTALSEYPSVLYPYKRSPLFPPRIIALW 408
           S++   H ++N  L+EYP V+   KR  L+P  ++A W
Sbjct: 53  SFMGGLHEVMNDGLTEYPLVINTLKRFNLYPEVVLASW 90


>UniRef50_Q6UWG8 Cluster: RKQG3127; n=60; Euteleostomi|Rep: RKQG3127
           - Homo sapiens (Human)
          Length = 758

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 295 SYLKISHVMLNTALSEYPSVLYPYKRSPLFPPRIIALW 408
           S+L+   +++N  L+EYP ++   KR  L+P  IIA W
Sbjct: 165 SFLEGLWMIMNDRLTEYPLIINAIKRFHLYPEVIIASW 202


>UniRef50_A7RJS9 Cluster: Predicted protein; n=4; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 755

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -1

Query: 526 KQAFFSLSKASCFPITNLWKKLTYGHGGCGYILFGVKIFTIML--LSGEETGDYV 368
           KQ+   L + SC P T++W  +   +GG G  L G+ I  ++L  ++  ++G  V
Sbjct: 436 KQSSDGLFRLSCRPSTSMWFDVMDQYGGIGPFLSGISIVGLVLYFVTSSDSGSLV 490


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,189,296
Number of Sequences: 1657284
Number of extensions: 10790344
Number of successful extensions: 22986
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22980
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)