Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P10
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.095
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.3  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.095
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 182 KLSYIILYNVFFFCNKIIFLEYNVVK 259
           +LSY+IL+++ F C  ++ L YNV++
Sbjct: 356 ELSYLILFSIGFNCFWVMKLLYNVLR 381


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 175 KAKVKLHYFVQCVFFL 222
           K   K+H FV+CVF +
Sbjct: 773 KTGSKIHLFVKCVFLM 788



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 77  IHLSYFFLVPIPAARGIHYL 18
           +HL Y FLV I  A  + Y+
Sbjct: 630 LHLLYIFLVGIMYAADVFYI 649


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 286 KTSSYLKISHVMLNTALSEY 345
           KTS  LKI    +NT  ++Y
Sbjct: 173 KTSEELKIPKAKINTGKTQY 192


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +2

Query: 203 YNVFFFCNKIIFL 241
           YN+ +FC  +++L
Sbjct: 330 YNILYFCRIMVYL 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,398
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)