Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P09
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.3  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   4.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.3  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   5.7  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   5.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.5  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   10.0 

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 467 TYY*MSDRGSALVIY 511
           T Y   DRG AL+IY
Sbjct: 203 TVYIADDRGDALIIY 217


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = -2

Query: 180 EIQLKYDYNYIESL*DRRGLSMDED*RTLRIQRREP 73
           ++++ +D NYI +     G+S  E  +  ++    P
Sbjct: 33  QLEVNFDGNYINNFETSNGISHQESGQPKQVDNETP 68


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 411 KNGSAMPFKEFFLSDI 364
           K+GS +PF   F++D+
Sbjct: 305 KSGSTVPFNFMFIADL 320


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 311 TTDKWIKEMWQEDVLRY 261
           TT+ W+++ W +  LR+
Sbjct: 76  TTNLWVEQSWYDYKLRW 92


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 311 TTDKWIKEMWQEDVLRY 261
           TT+ W+++ W +  LR+
Sbjct: 76  TTNLWVEQSWYDYKLRW 92


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 70  WTIMLTGLGLGRRRHYALH 14
           W +  T + + R +H ALH
Sbjct: 712 WIVEPTDVSVERNKHVALH 730


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 70  WTIMLTGLGLGRRRHYALH 14
           W +  T + + R +H ALH
Sbjct: 708 WIVEPTDVSVERNKHVALH 726


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -3

Query: 311 TTDKWIKEMWQEDVLRY 261
           TT+ W+++ W +  L++
Sbjct: 81  TTNVWVEQRWNDYKLKW 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,538
Number of Sequences: 438
Number of extensions: 2871
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)