Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P08
(254 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 111 2e-24
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 103 1e-21
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 93 1e-18
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 87 1e-16
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 85 4e-16
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 84 7e-16
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 70 1e-11
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 68 5e-11
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 67 8e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 66 2e-10
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 60 1e-08
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 55 3e-07
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 55 4e-07
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 54 6e-07
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 54 6e-07
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 53 1e-06
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 50 1e-05
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 7e-04
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 44 7e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 43 0.002
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 42 0.002
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 42 0.003
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 39 0.025
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 38 0.044
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 36 0.14
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 34 0.55
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 34 0.72
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 33 0.96
UniRef50_UPI00015C49D2 Cluster: hypothetical protein EcE24377A_0... 33 1.7
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 32 2.2
UniRef50_A0WXP2 Cluster: Sensor protein; n=3; Shewanella|Rep: Se... 31 3.9
UniRef50_Q6RKL2 Cluster: Polyketide synthase; n=9; Pezizomycotin... 31 3.9
UniRef50_Q52L21 Cluster: LOC733210 protein; n=8; Euteleostomi|Re... 31 6.7
UniRef50_Q11Y05 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q6F356 Cluster: Putative polyprotein; n=2; Oryza sativa... 31 6.7
UniRef50_A6H036 Cluster: Glycosyl transferase, group 2 family pr... 30 8.9
UniRef50_Q0V4F3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 111 bits (268), Expect = 2e-24
Identities = 51/59 (86%), Positives = 58/59 (98%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHS 199
MSSL+LQKRLAASV+RCGK+KVWLDPNEI+EIANT+SRQNIRK+IKDGL+IKKPV VHS
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHS 59
Score = 39.5 bits (88), Expect = 0.015
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 207 RVRKNTEARRKGRHCG 254
RVRKNTEARRKGRHCG
Sbjct: 62 RVRKNTEARRKGRHCG 77
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 103 bits (246), Expect = 1e-21
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 92.7 bits (220), Expect = 1e-18
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +2
Query: 47 RLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSC 211
RLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS C
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 55
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 53 ARCRKNTLARRKGRHMG 69
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 86.6 bits (205), Expect = 1e-16
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+ CGK+KV LDPNE ++IAN +S Q IRK+I+DGL+I KPV VHS
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 203 CSCSQ 217
C +
Sbjct: 61 AHCEK 65
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHS 199
M SL+LQ RLA+S++ CG+ +VWLDPNE EI N +SR+++RK+IKDG +I+KPV VHS
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHS 79
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 83.8 bits (198), Expect = 7e-16
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS+L QKRLA++V CGK+K+WLDPNE I N +SR+ IRK+ KD L+I+KPV VHS
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 SRC 63
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 69.7 bits (163), Expect = 1e-11
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHS 199
MSS+++ K +A+ ++ CGK+K+W+DPNE I T SR +IRK+I+DG ++KK HS
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHS 59
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 67.7 bits (158), Expect = 5e-11
Identities = 24/67 (35%), Positives = 49/67 (73%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
M +L++Q+R+AA +++CG+ ++W+DP + ++A+ +R++IR++IK+G++ KKPV S
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 203 CSCSQKH 223
+H
Sbjct: 61 YRARIRH 67
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 66.9 bits (156), Expect = 8e-11
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +2
Query: 47 RLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHS 199
+ A +++CG+ KVW+DPNE++EI+ + RQNI K++KD +I+KP +HS
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHS 69
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +2
Query: 8 AHRARMSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
A R+ + EL R + +RCGK+KVWLDP+E EI N SS Q IRK+ +DGL+I+K
Sbjct: 30 AFRSGAARAELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQK 87
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 59.7 bits (138), Expect = 1e-08
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
MS+ E +RLA+ ++ CGK+K+WLD NEI + S+R+ I+++IKD ++I K
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMK 53
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDG 166
M SL+LQKRLAAS++ CG +K+W+DPNE+ TS + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREG 48
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 41 QKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSCSQK 220
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ S +
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 221 H 223
H
Sbjct: 66 H 66
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 54.0 bits (124), Expect = 6e-07
Identities = 18/50 (36%), Positives = 37/50 (74%)
Frame = +2
Query: 32 LELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
+ +Q+R+AA +++CG ++VW+DP ++ + S+ +IR +IK+G++ KK
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKK 55
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 54.0 bits (124), Expect = 6e-07
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLV 172
MS L QKRLAA V+ G+ +VW DP+ EIA+ +R++IR+++ DG +
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTI 50
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLV 172
M+ L+ Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGII 50
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIK 178
M++L LQKRLAA V++CGK++V +P I SSR+ IR +I+ ++ K
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAK 52
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 7e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -2
Query: 196 MDSNWFLDDQTILDHLTDVLSGTSISDFMDLVWIKPHLLFTAS 68
M SN DDQ I D L D+L+G I DF+ L+ ++P L FT +
Sbjct: 1 MASNRLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/46 (36%), Positives = 32/46 (69%)
Frame = +2
Query: 44 KRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
K++AA M+ G +VW+D N I ++ + +SR+++RK+I ++ KK
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKK 52
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 29 SLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCS 208
+L +KRLA+ V G +++ DP + +IA+ +R +IR +I + KPV+ S
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 209 CSQKHRGAQERTS 247
K R +R S
Sbjct: 64 AQHKRRQKAKRGS 76
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 50 LAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
LA + G +KVWLDP ++ +I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDG-LVIKKPVAV 193
M++L+ QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V +
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI 58
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 38.7 bits (86), Expect = 0.025
Identities = 15/54 (27%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +2
Query: 41 QKRLAASVMR------CGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKP 184
QKRLAA + G +VW+DP ++ ++++ ++++R++I +G++ +P
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARP 59
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 199 GMDSNWFLDDQTILDHLTDVLSGTSISDFMDL 104
GMD + LDDQ I D ++D+L G I DF+ L
Sbjct: 134 GMDGHKILDDQRIFDQISDLLMGVGIGDFIGL 165
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 41 QKRLAASVMRCGKQKVWL--DPNEIHEIANTSSRQNIRKMIKDGLV 172
Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++
Sbjct: 6 QRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVI 51
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 34.3 bits (75), Expect = 0.55
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 41 QKRLAASVMRCGKQKVWLDPNEIHEIAN 124
QKR+AA ++ CG+ +VW++P + ++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +2
Query: 44 KRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSCSQKH 223
K A+ +++CG K+ ++P + + ++R+ I + K ++IKK + + S +K
Sbjct: 7 KNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKK--TIKGVSSYRKKL 64
Query: 224 RGAQERTSL 250
R A++++ L
Sbjct: 65 RKAKKQSGL 73
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 33.5 bits (73), Expect = 0.96
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 29 SLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMI 157
+L+ +KRLA+ V G ++ D + + ++A+ +R+NIR +I
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLI 46
>UniRef50_UPI00015C49D2 Cluster: hypothetical protein
EcE24377A_0280; n=2; Escherichia coli E24377A|Rep:
hypothetical protein EcE24377A_0280 - Escherichia coli
E24377A
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -2
Query: 238 FLRASVFLRTRAQGMDSNWFLDDQTILD---HLTDVLSGTSISDFMDLVWIKPHLLFTAS 68
+LRAS FL R ++ D+Q I D L VL F D+ W++ H TA
Sbjct: 73 YLRASRFLAVRYDLHLKSYTDDNQVISDFCQQLAQVLRARYPKSFFDIFWVREHDKATAQ 132
Query: 67 H 65
H
Sbjct: 133 H 133
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 164 GLVIKKPVAVHSLCSCSQKHRGAQE 238
GL+I+KPV VHS S +KH G E
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLME 527
>UniRef50_A0WXP2 Cluster: Sensor protein; n=3; Shewanella|Rep: Sensor
protein - Shewanella pealeana ATCC 700345
Length = 1186
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 217 LRTRAQGMDSNWFLDDQTILDHLTDVLSGTSISDFMDL 104
L+T +QG + + D+ +LD LTD+L G +I M +
Sbjct: 1054 LQTSSQGSEELVTIIDEAVLDELTDMLGGEAIDRMMSV 1091
>UniRef50_Q6RKL2 Cluster: Polyketide synthase; n=9;
Pezizomycotina|Rep: Polyketide synthase - Gibberella
moniliformis (Fusarium verticillioides)
Length = 2281
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 165 PSLIILRMFCLELVLAISWISFGSSHTFCLPHRITEAASL 46
PSL+ L CL++ L+ W ++G + T + H + E A+L
Sbjct: 960 PSLVQLASVCLQITLSKLWATWGITPTAVVGHSLGEYAAL 999
>UniRef50_Q52L21 Cluster: LOC733210 protein; n=8; Euteleostomi|Rep:
LOC733210 protein - Xenopus laevis (African clawed frog)
Length = 1290
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 35 ELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRK 151
E + R+AA +C +QK+ L+ + EIA+ + RQ +K
Sbjct: 933 ETEARVAALTKKCEEQKIQLEQSFQEEIASITERQQSKK 971
>UniRef50_Q11Y05 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 462
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Frame = -2
Query: 193 DSNW--FLDDQTILDHLTDV-LSGTSI-----SDFMDLVWIKPHLLFTASHNRGCKPL 44
++NW ++ Q IL++ + L+ TS S+ +D+VW + HLLFT S+N C+ L
Sbjct: 31 ENNWPDYITQQAILEYKKFMFLAATSNNMVSPSEIVDIVWHQ-HLLFTQSYNAFCQLL 87
>UniRef50_Q6F356 Cluster: Putative polyprotein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 1256
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 211 TRAQGMDSNWFLDDQTILDHLTDVLSGTSISD 116
T + G+DSNW++D T DH+T L +I D
Sbjct: 305 TASYGVDSNWYVDTGT-TDHVTGELEKLTIRD 335
>UniRef50_A6H036 Cluster: Glycosyl transferase, group 2 family
protein; n=1; Flavobacterium psychrophilum JIP02/86|Rep:
Glycosyl transferase, group 2 family protein -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 367
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 50 LAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKK 181
LA + C K+ + N IH I N QNI ++K +I +
Sbjct: 197 LAKQISFCNKETYYYHTNNIHSITNNKKDQNIIDILKSFDIINE 240
>UniRef50_Q0V4F3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 828
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -2
Query: 232 RASVFLRTRAQGMDSNWFLDDQTILD--HLTDVLSGTSISDFMDLVW 98
RA+V+ R ++ ++L +T+LD HL + SG DF D VW
Sbjct: 263 RANVYTRGLFWWLNPLFWLGSKTVLDVPHLPAIDSGLRSQDFFDEVW 309
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,819,850
Number of Sequences: 1657284
Number of extensions: 4472284
Number of successful extensions: 13300
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 13107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13299
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 10403478866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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