Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P08
         (254 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   2.1  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    20   4.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   4.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   4.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    19   6.3  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 192 SIPCARVRKNTEARRKGRH 248
           +I CAR R   + ++KG H
Sbjct: 206 AISCARYRFMPDIKKKGLH 224


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 19.8 bits (39), Expect = 4.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 129 LVLAISWISF 100
           L++ ISW+SF
Sbjct: 80  LIVIISWVSF 89


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.8 bits (39), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 81 CLPHRITEAASLFCNSREL 25
          C P RI  AASL    R++
Sbjct: 30 CRPRRIEIAASLDLTERQV 48


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 81  CLPHRITEAASLFCNSREL 25
           C P RI  AASL    R++
Sbjct: 161 CRPRRIEIAASLDLTERQV 179


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 132 ELVLAISWISFGSSHTFCLPHRIT 61
           ++VLA+ W+     H    P+ +T
Sbjct: 164 DMVLALKWVQENIIHFCGDPNNVT 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,439
Number of Sequences: 336
Number of extensions: 1046
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3951341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)