Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P08
(254 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 104 4e-23
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 103 1e-22
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 103 1e-22
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 103 1e-22
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 103 1e-22
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 103 1e-22
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 103 1e-22
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 103 1e-22
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 103 1e-22
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 73 2e-13
BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72 pro... 27 8.3
BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72 pro... 27 8.3
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 104 bits (250), Expect = 4e-23
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +2
Query: 8 AHRARMSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPV 187
A A MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV
Sbjct: 5 AAAAAMSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPV 64
Query: 188 AVHSLCSC 211
VHS C
Sbjct: 65 TVHSRARC 72
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 70 ARCRKNTLARRKGRHMG 86
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 103 bits (246), Expect = 1e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 23 MSSLELQKRLAASVMRCGKQKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSL 202
MS L LQKRLA+SV+RCGK+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 CSC 211
C
Sbjct: 61 ARC 63
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 61 ARCRKNTLARRKGRHMG 77
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 80 QKVWLDPNEIHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSC 211
+KVWLDPNE +EIAN +SRQ IRK+IKDGL+I+KPV VHS C
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 44
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 204 ARVRKNTEARRKGRHCG 254
AR RKNT ARRKGRH G
Sbjct: 42 ARCRKNTLARRKGRHMG 58
>BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 86 VWLDPNE--IHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSCSQKHRGAQER 241
+W + I+++ N+ ++I DG V+K+ + +H LCS S + Q R
Sbjct: 271 IWTEDGHSYIYQLLNSGLSKSIYPA--DGRVLKETIYLHLLCSTSVQENKEQSR 322
>BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 86 VWLDPNE--IHEIANTSSRQNIRKMIKDGLVIKKPVAVHSLCSCSQKHRGAQER 241
+W + I+++ N+ ++I DG V+K+ + +H LCS S + Q R
Sbjct: 271 IWTEDGHSYIYQLLNSGLSKSIYPA--DGRVLKETIYLHLLCSTSVQENKEQSR 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,555,788
Number of Sequences: 237096
Number of extensions: 718894
Number of successful extensions: 1582
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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