Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P07
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 500 NSLEQCSNPTPGNMADSLFRFIRKGL 577
           N  EQ  NPT  N+AD   R  RKGL
Sbjct: 82  NHFEQYPNPTYYNLADPA-RDSRKGL 106


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 330 ILSPSL*HMKSTSWLVLFLTEARWPRAFGSTHGETPSRSELMQL 199
           ILS     + + + L L L   +W   F +   + P +S L+QL
Sbjct: 139 ILSDVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 182


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 330 ILSPSL*HMKSTSWLVLFLTEARWPRAFGSTHGETPSRSELMQL 199
           ILS     + + + L L L   +W   F +   + P +S L+QL
Sbjct: 65  ILSDVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 108


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 497 VNSLEQCSNPTPGNMADSLF 556
           VNS EQ + PTP ++    F
Sbjct: 25  VNSSEQLTTPTPTDINSFYF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,932
Number of Sequences: 336
Number of extensions: 2571
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)