Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P07
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051847-1|AAH51847.1| 561|Homo sapiens zinc finger protein 394... 33 0.79
BC025241-1|AAH25241.1| 561|Homo sapiens zinc finger protein 394... 33 0.79
AY642122-1|AAT67053.1| 561|Homo sapiens zinc finger protein 394... 33 0.79
AK222948-1|BAD96668.1| 561|Homo sapiens zinc finger protein 99 ... 33 0.79
AK022360-1|BAB14021.1| 561|Homo sapiens protein ( Homo sapiens ... 33 0.79
U00686-1|AAA03565.1| 544|Homo sapiens putative novel receptor k... 31 4.2
BC017272-1|AAH17272.1| 589|Homo sapiens G protein-coupled recep... 31 4.2
BC009277-1|AAH09277.1| 576|Homo sapiens G protein-coupled recep... 31 4.2
AF040752-1|AAC09274.1| 560|Homo sapiens G protein-coupled recep... 31 4.2
AF040751-1|AAC09273.1| 589|Homo sapiens G protein-coupled recep... 31 4.2
AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens ... 29 9.8
>BC051847-1|AAH51847.1| 561|Homo sapiens zinc finger protein 394
protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.79
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 11 DQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSP 190
D C++ +D +TV + + VE KEL+ + Q+ +EEA+P G L E F+ K P
Sbjct: 178 DFCRESAQKDSGSTVPPSLESRVEN-KELIPMQQI---LEEAEPQGQLQEAFQ---GKRP 230
Query: 191 QLNSC 205
+ C
Sbjct: 231 LFSKC 235
>BC025241-1|AAH25241.1| 561|Homo sapiens zinc finger protein 394
protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.79
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 11 DQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSP 190
D C++ +D +TV + + VE KEL+ + Q+ +EEA+P G L E F+ K P
Sbjct: 178 DFCRESAQKDSGSTVPPSLESRVEN-KELIPMQQI---LEEAEPQGQLQEAFQ---GKRP 230
Query: 191 QLNSC 205
+ C
Sbjct: 231 LFSKC 235
>AY642122-1|AAT67053.1| 561|Homo sapiens zinc finger protein 394
protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.79
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 11 DQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSP 190
D C++ +D +TV + + VE KEL+ + Q+ +EEA+P G L E F+ K P
Sbjct: 178 DFCRESAQKDSGSTVPPSLESRVEN-KELIPMQQI---LEEAEPQGQLQEAFQ---GKRP 230
Query: 191 QLNSC 205
+ C
Sbjct: 231 LFSKC 235
>AK222948-1|BAD96668.1| 561|Homo sapiens zinc finger protein 99
variant protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.79
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 11 DQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSP 190
D C++ +D +TV + + VE KEL+ + Q+ +EEA+P G L E F+ K P
Sbjct: 178 DFCRESAQKDSGSTVPPSLESRVEN-KELIPMQQI---LEEAEPQGQLQEAFQ---GKRP 230
Query: 191 QLNSC 205
+ C
Sbjct: 231 LFSKC 235
>AK022360-1|BAB14021.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ12298 fis, clone MAMMA1001837, weakly similar to
ZINC FINGER PROTEIN 29. ).
Length = 561
Score = 33.1 bits (72), Expect = 0.79
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 11 DQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSP 190
D C++ +D +TV + + VE KEL+ + Q+ +EEA+P G L E F+ K P
Sbjct: 178 DFCRESAQKDSGSTVPPSLESRVEN-KELIPMQQI---LEEAEPQGQLQEAFQ---GKRP 230
Query: 191 QLNSC 205
+ C
Sbjct: 231 LFSKC 235
>U00686-1|AAA03565.1| 544|Homo sapiens putative novel receptor
kinase protein.
Length = 544
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 80 ECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 232
+C + + + + + + E +P G L +F+++CA P+L+ C+ + LDGV+
Sbjct: 9 QCEELRLSLERDYHSLCERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 56
>BC017272-1|AAH17272.1| 589|Homo sapiens G protein-coupled receptor
kinase 6 protein.
Length = 589
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 80 ECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 232
+C + + + + + + E +P G L +F+++CA P+L+ C+ + LDGV+
Sbjct: 41 QCEELRLSLERDYHSLCERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88
>BC009277-1|AAH09277.1| 576|Homo sapiens G protein-coupled receptor
kinase 6 protein.
Length = 576
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 80 ECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 232
+C + + + + + + E +P G L +F+++CA P+L+ C+ + LDGV+
Sbjct: 41 QCEELRLSLERDYHSLCERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88
>AF040752-1|AAC09274.1| 560|Homo sapiens G protein-coupled receptor
kinase 6, splice variant C protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 80 ECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 232
+C + + + + + + E +P G L +F+++CA P+L+ C+ + LDGV+
Sbjct: 41 QCEELRLSLERDYHSLCERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88
>AF040751-1|AAC09273.1| 589|Homo sapiens G protein-coupled receptor
kinase 6, splice variant B protein.
Length = 589
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 80 ECVKELVDVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 232
+C + + + + + + E +P G L +F+++CA P+L+ C+ + LDGV+
Sbjct: 41 QCEELRLSLERDYHSLCERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88
>AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens cDNA
FLJ46164 fis, clone TESTI4002799, highly similar to
DNA-directed RNA polymerase I 135 kDa polypeptide (EC
2.7.7.6). ).
Length = 1135
Score = 29.5 bits (63), Expect = 9.8
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 314 KDGDRIALF-IAESGPECLQE-KADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKY-DEL 484
K GD +F I GP LQ+ D + KL+ P N L+T E Y
Sbjct: 786 KQGDSSLVFGIKPGGPRVLQKLDDDGLPFIGAKLQYGDPYYSYLN-LNTGESFVMYYKSK 844
Query: 485 TTCVVNSLEQCSNPT 529
CVV++++ CSN T
Sbjct: 845 ENCVVDNIKVCSNDT 859
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,164,585
Number of Sequences: 237096
Number of extensions: 1525766
Number of successful extensions: 4133
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4133
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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