Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P06
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z75530-6|CAA99790.1|  720|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF217185-1|AAF20162.1|  720|Caenorhabditis elegans UNC-112 protein.    29   3.1  
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr...    28   4.1  
AL032655-3|CAB63412.1|  131|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U64833-3|AAB04816.2|  211|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical
           protein F53A2.1 protein.
          Length = 859

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 103 RRNEVTFHIHNFYVDVQ*KFSNMVLSMHSCNPWV 204
           +R +   H+H+ Y+     FS+++LS++ C P V
Sbjct: 19  KRKKKHIHLHHIYISTT--FSSIILSLYFCGPLV 50


>Z75530-6|CAA99790.1|  720|Caenorhabditis elegans Hypothetical
           protein C47E8.7 protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 386 SAAKDLNLANYVNNSIKELDIKRDWYDETTW 478
           S   +LN+   +   + E D++RDW D   W
Sbjct: 31  SVLGNLNVGGLMLELVSECDVERDWSDHALW 61


>AF217185-1|AAF20162.1|  720|Caenorhabditis elegans UNC-112 protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 386 SAAKDLNLANYVNNSIKELDIKRDWYDETTW 478
           S   +LN+   +   + E D++RDW D   W
Sbjct: 31  SVLGNLNVGGLMLELVSECDVERDWSDHALW 61


>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
           protein K02A2.3 protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 110 MKLLSIFITFMLMFSKSLAIWCYQCTAATPGCLEPFNWRG 229
           + LL   + F +MF+ S+ + C  CT AT    +   W+G
Sbjct: 548 LSLLGAALCFFIMFASSVPLACIACT-ATAVIYKYVEWKG 586


>AL032655-3|CAB63412.1|  131|Caenorhabditis elegans Hypothetical
           protein Y6B3B.7 protein.
          Length = 131

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 128 FITFMLMFSKSLAIWCYQCTAATPGC 205
           F+ F+L F  ++AI CY C +    C
Sbjct: 13  FLVFLLCFEATIAITCYDCHSDQGTC 38


>Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical
           protein K02B9.3a protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 487 AKTPCCLIIPIPFYVQFFNAVVDIISQI*ILSSRPASFIC 368
           +KTP  +I PI     FFN ++ I+    ++ S    F+C
Sbjct: 166 SKTPISVIPPIIICTLFFNLILQILITDSLIFSETPWFVC 205


>U64833-3|AAB04816.2|  211|Caenorhabditis elegans Hypothetical
           protein B0507.4 protein.
          Length = 211

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 419 VNNSIKELDIKRDWYDETTWCF 484
           + NS+ + D+  DWY+ET   F
Sbjct: 135 IRNSLDKADMSNDWYEETRALF 156


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 481 FLLPGSSL*WRIKYIYTHIICNNIM 555
           +L     L W+I++IY  ++C N++
Sbjct: 144 YLKSKKDLKWKIRFIYFFVVCKNVV 168


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 481 FLLPGSSL*WRIKYIYTHIICNNIM 555
           +L     L W+I++IY  ++C N++
Sbjct: 144 YLKSKKDLKWKIRFIYFFVVCKNVV 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,903,512
Number of Sequences: 27780
Number of extensions: 299146
Number of successful extensions: 576
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)