Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P05
         (393 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O94040 Cluster: Putative uncharacterized protein Ca41C1...    37   0.12 
UniRef50_Q7RB33 Cluster: F-box domain, putative; n=1; Plasmodium...    32   3.4  
UniRef50_Q5UQ00 Cluster: Probable formamidopyrimidine-DNA glycos...    32   3.4  
UniRef50_Q6CRQ0 Cluster: Similar to sgd|S0006062 Saccharomyces c...    32   4.5  
UniRef50_A1CFE1 Cluster: Fungal specific transcription factor do...    32   4.5  

>UniRef50_O94040 Cluster: Putative uncharacterized protein
           Ca41C10.06c; n=2; Candida albicans|Rep: Putative
           uncharacterized protein Ca41C10.06c - Candida albicans
           (Yeast)
          Length = 527

 Score = 37.1 bits (82), Expect = 0.12
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -2

Query: 122 PELQLPFSRFIDLSLERNAIAIDFLNTYSSNLLPTAYFP 6
           P+ QLPF++++  S  RN++A  F N  +SN+LP AY P
Sbjct: 266 PQQQLPFNQYLQPS-NRNSVATSFSN--ASNILPIAYIP 301


>UniRef50_Q7RB33 Cluster: F-box domain, putative; n=1; Plasmodium
           yoelii yoelii|Rep: F-box domain, putative - Plasmodium
           yoelii yoelii
          Length = 573

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 31  FEE*VFKKSIAIALRS-NERSIKREKGNCSSGALYICKRDDYTSYSPVSSSEIRPIFLPI 207
           F   + KK+I + + + N+  IK++  N    A +  K D Y  ++ +     R IF  I
Sbjct: 95  FTSIIKKKNICVPVNNQNKMEIKKKSDNLIKRAHHFSKHDKYDIFNNIGDDIFRYIFSCI 154

Query: 208 KYKTRLDYDSTFC 246
           + K  +  +  FC
Sbjct: 155 ENKNLMLLNKRFC 167


>UniRef50_Q5UQ00 Cluster: Probable formamidopyrimidine-DNA
           glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase)
           (DNA-(apurinic or apyrimidinic site) lyase); n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Probable
           formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase) - Mimivirus
          Length = 287

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 52  KSIAIALRSNERSIKREKGN-CSSGALYICKRDDYTSYSPVSSSEIRPIFLPIKYKTRLD 228
           K   +AL  +++ I    GN   +  LY  K D +   S ++  EI  ++  IKY+T+L 
Sbjct: 154 KQPIVALLMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQEIENLWYWIKYETKLA 213

Query: 229 YDS 237
           YDS
Sbjct: 214 YDS 216


>UniRef50_Q6CRQ0 Cluster: Similar to sgd|S0006062 Saccharomyces
           cerevisiae YPL141c; n=1; Kluyveromyces lactis|Rep:
           Similar to sgd|S0006062 Saccharomyces cerevisiae YPL141c
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 909

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +1

Query: 49  KKSIAIALRSNERSIKREKGNCSSGALYICKRDDYTSYSPVSSSEIRPIFLPIKYKTRLD 228
           + SI + +  N+  I     +   G  Y   R+ Y S SPV ++   P F+P  + +   
Sbjct: 483 RNSIIVEVSPNKEVISSSSSSAIPGMSYSASRESYISTSPVRNAAQSPKFVPGSFTSNTS 542

Query: 229 YDSTFCFCSSDLSMVR 276
           + +   F SS  S  R
Sbjct: 543 HHNN-KFGSSQQSRPR 557


>UniRef50_A1CFE1 Cluster: Fungal specific transcription factor
           domain protein; n=4; Aspergillus|Rep: Fungal specific
           transcription factor domain protein - Aspergillus
           clavatus
          Length = 730

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 149 SSLLHMYNAPELQLPFSRFIDLSLERNAIAIDFLNTYSSNLL 24
           SS +H  N+PE+++PF   +DLS     I   F    +S  L
Sbjct: 450 SSAIHQVNSPEMEVPFRYLVDLSRIAEDIYSSFYTLRASQYL 491


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,477,497
Number of Sequences: 1657284
Number of extensions: 6535428
Number of successful extensions: 15191
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15189
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)