Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P05
         (393 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY781862-1|AAW29164.1|  129|Homo sapiens AF1 non-allergic IgE he...    28   9.5  
AM233771-1|CAJ84044.1|  119|Homo sapiens immunoglobulin heavy ch...    28   9.5  

>AY781862-1|AAW29164.1|  129|Homo sapiens AF1 non-allergic IgE heavy
           chain VH4-61 protein.
          Length = 129

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 55  SIAIALRSNERSIKREKGNCSSGALYICKRDDYTSY 162
           SI++    N  S+K      +  A+Y C RD  T Y
Sbjct: 70  SISVGTSKNRFSLKLSSATAADTAIYYCARDSLTWY 105


>AM233771-1|CAJ84044.1|  119|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 55  SIAIALRSNERSIKREKGNCSSGALYICKRDDYTSY 162
           SI++    NE S+K      +  A+Y C RDD+ +Y
Sbjct: 69  SISLDSSRNEFSLKLTSLTAADTAVYYCARDDHGNY 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,607,218
Number of Sequences: 237096
Number of extensions: 905090
Number of successful extensions: 2711
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)