Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P04
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   3.6  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   4.8  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   4.8  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   4.8  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 144 NTAFEKNLRKVCRKVINKHCLEGGMKKTADVVSY 43
           N   +  +R+ C++   K CL  GM+    V  Y
Sbjct: 228 NCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEY 261


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 144 NTAFEKNLRKVCRKVINKHCLEGGMKKTADVVSY 43
           N   +  +R+ C++   K CL  GM+    V  Y
Sbjct: 25  NCEIDMYMRRKCQECRLKKCLTVGMRPECMVPEY 58


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 326 LFXXXXXXLDNLMRLENIKN*PSRY 252
           LF       +NLM+LE     PSR+
Sbjct: 514 LFSSQQKTKNNLMKLETTPVLPSRF 538


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 242 EKPLSKLVATSSRREISTAFKIKV*KLNAN 153
           E  L KLV  ++R+ IS   K+    +NAN
Sbjct: 93  EIQLDKLVEMANRKNISIDVKMLSECINAN 122


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 129 KNLRKVCRK 103
           KNLRKVC K
Sbjct: 37  KNLRKVCSK 45


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 129 KNLRKVCRK 103
           KNLRKVC K
Sbjct: 11  KNLRKVCSK 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,546
Number of Sequences: 438
Number of extensions: 1414
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)