Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P02
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   8.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   8.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   8.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 33  WAIGVRCSVTSSSLRRWIWQ*F 98
           W   V C V  +++  W+W  F
Sbjct: 56  WRSYVVCDVAYNNVNNWLWTPF 77


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 164 CHLAKAFLISGIVEFRLSPFPISQEE 241
           C++    L+ GI+   L PF   QE+
Sbjct: 362 CNIVATHLVCGILGSILVPFFYVQED 387


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 59  HKQQPSEVDL 88
           HK+QP+ +DL
Sbjct: 174 HKRQPTSIDL 183


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 59  HKQQPSEVDL 88
           HK+QP+ +DL
Sbjct: 174 HKRQPTSIDL 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,791
Number of Sequences: 438
Number of extensions: 1545
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)