Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P01
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   5.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.0  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   6.6  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   6.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 246 INHSIYSNVNIEKNHLNYLSLTHKDN 169
           +NH+  S VNI++    Y  L++  N
Sbjct: 484 VNHAAASRVNIQRMKQVYQQLSNYRN 509


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -1

Query: 309 NLVYISFAMSNY*LY*KFFFSINHSIYSNVNIEKNHLNY 193
           NLVY+    +N+ ++ +  F+     Y N ++E   + Y
Sbjct: 156 NLVYVYCCDNNFNVFLRQVFTCRCKDYKNEDLEDQPVVY 194


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 88  FIREMCHIVFVKSR*IFFIFVCVTPNIVVFV 180
           + R  C I FV+S   + I + +   ++V +
Sbjct: 54  YSRLACEIQFVRSMGYYLIQIYIPSGLIVII 84


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 249 KKKIFSIANNCSLRNLYKPNL 311
           KK +   + NC + N+Y  NL
Sbjct: 45  KKNLIVGSENCLVLNVYTKNL 65


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 YLLSLDKFFSYSC 151
           Y+L+++ FFS  C
Sbjct: 341 YVLNMEHFFSVKC 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,581
Number of Sequences: 336
Number of extensions: 2036
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)