Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_P01
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep...    29   2.6  
AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T mismatch...    29   2.6  
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p...    29   2.6  
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P...    28   6.1  

>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch depedent
            uracil/thymineDNA glycosylase protein.
          Length = 1738

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 332  HLKGLAIFTNIKNSDPNIYLI 394
            HL G A+ TN+ NS+PN++ I
Sbjct: 1587 HLIGSALGTNVNNSEPNLHTI 1607


>AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T
            mismatch-specific thymineDNA glycosylase protein.
          Length = 1095

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 332  HLKGLAIFTNIKNSDPNIYLI 394
            HL G A+ TN+ NS+PN++ I
Sbjct: 944  HLIGSALGTNVNNSEPNLHTI 964


>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
            protein.
          Length = 1738

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 332  HLKGLAIFTNIKNSDPNIYLI 394
            HL G A+ TN+ NS+PN++ I
Sbjct: 1587 HLIGSALGTNVNNSEPNLHTI 1607


>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
            protein.
          Length = 1931

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = +2

Query: 92   LEKCVISYLLSLDKFFSYSCV*RQILLSLCVR----ER*FKWFFSIF 220
            L KC+  YLL+L +F+         LLSL  R    +R F+W   +F
Sbjct: 1381 LRKCLQKYLLNLHQFYDVQKRNPSSLLSLYRRTRDFQRNFEWLLEVF 1427


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,725,258
Number of Sequences: 53049
Number of extensions: 284305
Number of successful extensions: 557
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)