Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P01
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 31 0.46
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 31 0.46
AL021489-2|CAA16370.1| 333|Caenorhabditis elegans Hypothetical ... 29 1.9
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 28 2.5
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 28 2.5
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 28 2.5
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 28 2.5
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 28 2.5
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 28 2.5
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 27 4.3
AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical ... 27 4.3
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 27 5.7
Z81112-5|CAB03276.1| 245|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81027-4|CAB02689.1| 245|Caenorhabditis elegans Hypothetical pr... 27 7.5
U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium transp... 27 7.5
U64843-11|AAL08038.1| 365|Caenorhabditis elegans Hypothetical p... 26 10.0
AF016655-1|AAK72055.3| 318|Caenorhabditis elegans Serpentine re... 26 10.0
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 30.7 bits (66), Expect = 0.46
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 246 INHSIYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNKYD 109
+N I N + E H+++L L I Y H EKN+ ++ + D
Sbjct: 696 VNKLISLNQHPEVQHISFLELESFKKQISDYLHTVEKNIQKIKRND 741
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 30.7 bits (66), Expect = 0.46
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 246 INHSIYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNKYD 109
+N I N + E H+++L L I Y H EKN+ ++ + D
Sbjct: 903 VNKLISLNQHPEVQHISFLELESFKKQISDYLHTVEKNIQKIKRND 948
>AL021489-2|CAA16370.1| 333|Caenorhabditis elegans Hypothetical
protein Y44A6C.2 protein.
Length = 333
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 246 INHSIYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNKYD 109
++H +Y+N + + L+YLS+TH D + E E + L+K D
Sbjct: 145 LHHEVYTN-SPKMFQLDYLSVTHSDWMVPSDLEEMENKIVYLDKSD 189
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 340 LQVPKWAIETKFGL 299
+Q+PKW IETK GL
Sbjct: 261 VQIPKWKIETKLGL 274
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 132 NFFHIRVCNAKYCCLCV*ERDSLNGFFLYSH*NILNGLL 248
N H CNA +C LC ++++ + YS NG L
Sbjct: 383 NKMHCTKCNASFCWLCSKTLNNVDPYSHYSEKGSCNGRL 421
>AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.1 protein.
Length = 326
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 415 IYSNIFFYQIDIWVTVFYISEYC*TLQVPKWAIETKFGLY 296
+YSN+ F I + EYC + PK K+ L+
Sbjct: 11 VYSNVLFIIAGISFPIHLFGEYCILFKTPKVMKSVKWSLF 50
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 261 KFFFSINHSIYSNVNIEK 208
KF FS+ SI+S +N++K
Sbjct: 250 KFLFSVEKSIFSTINVQK 267
>Z81112-5|CAB03276.1| 245|Caenorhabditis elegans Hypothetical
protein AH10.2 protein.
Length = 245
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 210 KNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNKYDMTHFSNKKNLALILIMSTIK 49
K+H L ++ +N T EY N + LN Y FS+ A++L+ S K
Sbjct: 62 KDHQETLEISFSNNVSDLTTVEYHMNSNELNTYQTILFSD----AVLLVQSVFK 111
>Z81027-4|CAB02689.1| 245|Caenorhabditis elegans Hypothetical
protein AH10.2 protein.
Length = 245
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 210 KNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNKYDMTHFSNKKNLALILIMSTIK 49
K+H L ++ +N T EY N + LN Y FS+ A++L+ S K
Sbjct: 62 KDHQETLEISFSNNVSDLTTVEYHMNSNELNTYQTILFSD----AVLLVQSVFK 111
>U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium
transporter homolog protein4 protein.
Length = 558
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 333 CPNGLSKLNLVYISFAMSNY*LY*KFFF 250
CPN L + Y F ++N+ Y KFFF
Sbjct: 71 CPNNTIGLFVGYSEFFLANFSNYPKFFF 98
>U64843-11|AAL08038.1| 365|Caenorhabditis elegans Hypothetical
protein K06C4.17 protein.
Length = 365
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 59 DIINI-RARFFLLEKCVISYLLSLDKFF 139
D+ N+ R + FL+ VIS +LSL KFF
Sbjct: 175 DLCNMERTKRFLVGSLVISSILSLPKFF 202
>AF016655-1|AAK72055.3| 318|Caenorhabditis elegans Serpentine
receptor, class h protein297 protein.
Length = 318
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 418 DIYSNIFFYQIDIWVTVFYISEYC*TLQVPKWAIETKFGLY 296
D+YS I + V + YC L+ PK K+ L+
Sbjct: 8 DVYSKILYVLAGFSVPIHIFGGYCILLKTPKIMKSVKWALF 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,754,916
Number of Sequences: 27780
Number of extensions: 174362
Number of successful extensions: 390
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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