Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_P01
(429 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 0.63
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.63
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.63
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 2.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 5.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 5.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.7
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 7.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.7
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 7.7
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 243 NHSIYSNVNIEKNHLNYLSLTHKDNNI 163
N+S Y+N N N+ NY L + N I
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYI 116
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 2.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -1
Query: 240 HSIYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNK 115
H VNIEK+ N++ TH+++ SR ++
Sbjct: 192 HDTVLVVNIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSR 233
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 246 INHSIYSNVNIEKNHLNYLSLTHKDNN 166
+NHS S +NIE+ Y L N
Sbjct: 488 VNHSKSSRINIERMKQVYQQLNKYRGN 514
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = -1
Query: 240 HSIYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSRLNK 115
H VNI+K+ N++ TH+++ SR ++
Sbjct: 192 HDTVLVVNIKKSGNESKKYATSSNSLRNRTHDFQHTSSRYSR 233
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 88 FIREMCHIVFVKSR*IFFIFVCVTPNIVVFV 180
+ R C I FV+S + I + + ++V +
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVII 237
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 88 FIREMCHIVFVKSR*IFFIFVCVTPNIVVFV 180
+ R C I FV+S + I + + ++V +
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVII 237
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 171 NNIWRYTHEYEKNLSRLNKYDMTHFS 94
N+ WR TH + R Y++ F+
Sbjct: 207 NDSWRITHNFFYFDPRYGNYNINGFN 232
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 88 FIREMCHIVFVKSR*IFFIFVCVTPNIVVFV 180
+ R C I FV+S + I + + ++V +
Sbjct: 146 YSRLACEIQFVRSMGYYLIQIYIPSGLIVII 176
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 20.6 bits (41), Expect = 7.7
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -1
Query: 234 IYSNVNIEKNHLNYLSLTHKDNNIWRYTHEYEKNLSR 124
+YS++N +NH + H N R E + R
Sbjct: 41 VYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMRERER 77
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,331
Number of Sequences: 438
Number of extensions: 2449
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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