Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O22
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical... 28 3.0
Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 27 6.9
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 27 6.9
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 27 6.9
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = +1
Query: 193 SGGGRRRDYNPVSWKMYFEKYVDVKVEDGKFRVYLSPEPDHPERPRIITLHGGGYSGLSW 372
S G++R+ + + W +F++ D ++ F VY+ E P LHGGGYSGL+W
Sbjct: 45 STSGKKREMSELPWSDFFDEKKDANIDGDVFNVYIKGN----EGPIFYLLHGGGYSGLTW 100
Query: 373 SLFTEEITNMIHCQVVSIDLRGHGESKLQNSDDL 474
+ F +E+ +I C+VV+ DLRGHG++K + DL
Sbjct: 101 ACFAKELATLISCRVVAPDLRGHGDTKCSDEHDL 134
>AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical
protein Y55F3AM.10 protein.
Length = 246
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 250 KYVDVKVEDGKFRVYLS---PEPDHPERPRIITLHGGGYSGLSWSLFTEEIT-NMIHCQV 417
+Y + +VE G V++ P H + +I LHG +S +W+ T + +
Sbjct: 43 EYDESRVELGTHSVFVREARPPGAHYSKATVIFLHGQSFSSSTWTENNLLRTFAALGYRA 102
Query: 418 VSIDLRGHGESK 453
++IDL G G+++
Sbjct: 103 IAIDLPGSGQTR 114
>Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical
protein R05D7.4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 292 YLSPEPDHPERPRIITLHGGGYSGLSWSLFTEEITNMIHCQVVSIDLRGHGES 450
Y SPE D P +I +HG +W+ + + + V ++D+R HG S
Sbjct: 37 YSSPELDR-NSPLVI-VHGLFGQKQNWNSVGKALHKKLEAPVYAVDVRNHGSS 87
>Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 15 RGVQKLKTNTSKYNKRNYKLFLL*HNIDLNYVCFTQKYNE 134
+ ++++ TN +K N+ + LFL + +D + CF K E
Sbjct: 50 KSIRQVVTNYAKVNQAQWVLFLKNNQLDNFFNCFLNKSPE 89
>Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 15 RGVQKLKTNTSKYNKRNYKLFLL*HNIDLNYVCFTQKYNE 134
+ ++++ TN +K N+ + LFL + +D + CF K E
Sbjct: 50 KSIRQVVTNYAKVNQAQWVLFLKNNQLDNFFNCFLNKSPE 89
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 250 KYVDVKVEDGKFRVYLSPEPDHPERPRIITLHGGGY---SGLSWSLFTEEITNMIHCQVV 420
K+ D + D F+VY++P + + HG G ++++ T + +VV
Sbjct: 617 KFNDQHIPDSPFKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTHRAKGHLEAKVV 676
Query: 421 S 423
+
Sbjct: 677 T 677
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 250 KYVDVKVEDGKFRVYLSPEPDHPERPRIITLHGGGY---SGLSWSLFTEEITNMIHCQVV 420
K+ D + D F+VY++P + + HG G ++++ T + +VV
Sbjct: 566 KFNDQHIPDSPFKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTHRAKGHLEAKVV 625
Query: 421 S 423
+
Sbjct: 626 T 626
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 250 KYVDVKVEDGKFRVYLSPEPDHPERPRIITLHGGGY---SGLSWSLFTEEITNMIHCQVV 420
K+ D + D F+VY++P + + HG G ++++ T + +VV
Sbjct: 564 KFNDQHIPDSPFKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTHRAKGHLEAKVV 623
Query: 421 S 423
+
Sbjct: 624 T 624
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 61 EITNYFCYDIILILIMSALHKSIMKNKLPPRCPRTSDVSKLAPFSGGGRRRDYNPVSW 234
+ITN C D ++ +I L + ++ K P +S + FS R+ D SW
Sbjct: 630 DITNAVCDDSLVCIITGVLVRLLVIQKADAASP---SISNVLSFSSLQRQHDARRFSW 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,653,409
Number of Sequences: 27780
Number of extensions: 243450
Number of successful extensions: 543
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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