Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O22
         (474 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    26   0.18 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   3.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.1  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   8.9  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   8.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   8.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 205 RRRDYNPVSWKMYFEKYVDVKVEDGKFRVYLSPEPDHPERP 327
           +R D+ P  +K+      +  V     RV+L P+ DH  RP
Sbjct: 511 KRLDHQPYQYKIAVHS--EQNVPGAVVRVFLGPKHDHQGRP 549


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 158 GHLGGSLFFIILLCKADIIKI 96
           G LGG+L F+ +  KAD I +
Sbjct: 449 GTLGGTLVFVEMKKKADFIAV 469


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 268 VEDGKFRVYLSPEPDHPERPRIITLHGGGYSG 363
           +  G+ RV +  +PD PE   I TL  G + G
Sbjct: 260 ISRGQVRVTIK-QPDTPEEKYIRTLSKGDFFG 290


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +1

Query: 115 LHK-SIMKNKLPPRCPR 162
           LH+ S+ K   PP+CPR
Sbjct: 554 LHRASLSKTPQPPQCPR 570



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 271 EDGKFRVYLSPEPDHPERPRIITLHGGGYSGL 366
           +D   R  LS  P  P+ PR   L     SG+
Sbjct: 551 DDELHRASLSKTPQPPQCPRFRKLDSPSDSGI 582


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 SDVSKLAPFSGGGRRRDYNPVSWKMYFEKY-VDVKVEDGKFRVYLSPEPDHPERPRI 333
           S +S    ++    + +YN  + K+Y++ Y ++++       VY    P  P  P I
Sbjct: 316 SSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINIEQIPVPVPVYYGNFPPRPMGPWI 372


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 209  RRPPPLNGANFETSD 165
            R+ PP+ G+N+ T D
Sbjct: 1651 RKLPPVPGSNYNTCD 1665


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 181 LAPFSGGGRRRDYNPVSWK 237
           +APF  G RR    P  WK
Sbjct: 404 VAPFLIGSRRTSPPPEDWK 422


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 460 SVIYFHHDLSNQWI 419
           ++ +F+ DLS +WI
Sbjct: 109 AISFFNDDLSTRWI 122


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 460 SVIYFHHDLSNQWI 419
           ++ +F+ DLS +WI
Sbjct: 109 AISFFNDDLSTRWI 122


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 460 SVIYFHHDLSNQWI 419
           ++ +F+ DLS +WI
Sbjct: 109 AISFFNDDLSTRWI 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,990
Number of Sequences: 438
Number of extensions: 3806
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)