Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O20
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY0143...    34   2.4  
UniRef50_A5BQM1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_Q9GQN5 Cluster: Transcriptional regulator ATRX homolog;...    34   3.1  
UniRef50_Q4SD50 Cluster: Chromosome 1 SCAF14643, whole genome sh...    33   4.1  
UniRef50_A0C1H1 Cluster: Chromosome undetermined scaffold_142, w...    33   5.5  
UniRef50_Q4Z134 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY01439;
            n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01439 - Plasmodium yoelii yoelii
          Length = 4099

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = -3

Query: 260  EEIKILLFFNT--LSLICS*KYNNRVAVYFKLTKDRLLYILYILFSMI**LSVNRQR*NS 87
            +E+K +LF +    S I S  +N    +Y+ L+K     I Y L  MI  L +   R NS
Sbjct: 3140 DELKSILFISLDQNSNITS-LFNKSKQIYYALSKINSKNIFYYLKEMIH-LILKTNRKNS 3197

Query: 86   SFVIFPQQVKSCYFFFVLLLLANW 15
            S  I+ ++V   Y FF+++   N+
Sbjct: 3198 SKQIYQRRVYQFYHFFIIIQTINY 3221


>UniRef50_A5BQM1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1610

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 226 KVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGR 360
           K ++N + FIS  N S+ G L  + K+R L +L  T++Y    GR
Sbjct: 759 KEIENRRCFISKPNESKRGTLLASRKDRELKKLVNTINYDGLAGR 803


>UniRef50_Q9GQN5 Cluster: Transcriptional regulator ATRX homolog; n=4;
            Sophophora|Rep: Transcriptional regulator ATRX homolog -
            Drosophila melanogaster (Fruit fly)
          Length = 1311

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = -2

Query: 618  IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
            +A N + +F V W   H D  S FRVY   + KPC Y++ +  + T+       E++ Y 
Sbjct: 1007 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 1057

Query: 438  RKFKSQAPATR 406
            R+   QA A R
Sbjct: 1058 RQVAKQATAKR 1068


>UniRef50_Q4SD50 Cluster: Chromosome 1 SCAF14643, whole genome
           shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 1
           SCAF14643, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 742

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 498 IKLLRTICPNMSMKEEESYSRKFKSQAPATRERILLLSNEILSIAISTP 352
           IKLL++ C +  +  E S+ R FKSQ   + E    LS EI  ++ S+P
Sbjct: 434 IKLLQSACNSYCLTPEASFLRWFKSQTWLSDEESYALSCEIEGLSDSSP 482


>UniRef50_A0C1H1 Cluster: Chromosome undetermined scaffold_142,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_142,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 552

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 196 LLYFHEHIRDKVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGRYCN 369
           L Y  E I+++   +NK+ +   NR  + + T+N  E+ L +  + L   P    YCN
Sbjct: 60  LKYIEELIQERSSDDNKLQVVHQNRFVMNVNTKNQIEKALDQYDLPLQQNPNNELYCN 117


>UniRef50_Q4Z134 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 947

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 217 IRDKVLKNNKIFISSNNRSQIGILTQNSKERLL 315
           +RDKV++NNKI  ++NN S I I T   +  LL
Sbjct: 747 LRDKVIENNKI-ANNNNMSNIAINTDTRRNNLL 778


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,040,188
Number of Sequences: 1657284
Number of extensions: 9664702
Number of successful extensions: 21761
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21758
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)