Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O20
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.89 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 91  TVHLSFFLSRLRVVIFFLFCCYW 23
           TVHL F+   +   + FL C Y+
Sbjct: 80  TVHLLFYCPFIIFTVHFLLCTYY 102


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 561 RSSSFRVYLGQENKPCLYMFTIKLL 487
           ++SSF V+   EN P LY+  + ++
Sbjct: 227 QASSFVVWPLVENNPTLYLIPVSVI 251


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 561 RSSSFRVYLGQENKPCLYMFTIKLL 487
           ++SSF V+   EN P LY+  + ++
Sbjct: 227 QASSFVVWPLVENNPTLYLIPVSVI 251


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
          beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 58 RVVIFFLFCC 29
          RV+ FF FCC
Sbjct: 8  RVLFFFSFCC 17


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 308 LSLEFCVRMPI*DRLLEEIKILL 240
           L +EF  R+P  D+LL E +I L
Sbjct: 368 LIVEFAKRLPGFDKLLREDQIAL 390


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 89  SSFVIFPQQVKSCYFFFVLLL 27
           S  +IF QQ+  C+F  V+ L
Sbjct: 179 SYLLIFVQQIPFCFFVRVIRL 199


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 459 KEEESYSRKFKSQAPATRERIL 394
           K+E  Y  K    AP  +ER++
Sbjct: 472 KDEADYKDKLHKVAPRIKERMM 493


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 450 ESYSRKFKSQAPATRERILLLSNEILSIAISTPKWEVGKCD 328
           E +  + K Q+P++  RIL +  ++     S   + +  CD
Sbjct: 16  EPHRMQIKPQSPSSSSRILDIPCKVCGDFSSGKHYNIFACD 56


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 450 ESYSRKFKSQAPATRERILLLSNEILSIAISTPKWEVGKCD 328
           E +  + K Q+P++  RIL +  ++     S   + +  CD
Sbjct: 16  EPHRMQIKPQSPSSSSRILDIPCKVCGDFSSGKHYNIFACD 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,466
Number of Sequences: 336
Number of extensions: 2771
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)