Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O20
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069822-1|AAL39967.1| 655|Drosophila melanogaster SD07188p pro... 34 0.18
AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p pro... 34 0.18
AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DN... 34 0.18
AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB... 34 0.18
AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA... 34 0.18
BT029945-1|ABM92819.1| 657|Drosophila melanogaster IP16959p pro... 30 2.2
BT023833-1|AAZ86754.1| 657|Drosophila melanogaster LD27920p pro... 30 2.2
AY069278-1|AAL39423.1| 318|Drosophila melanogaster GM13274p pro... 30 2.2
AY051913-1|AAK93337.1| 441|Drosophila melanogaster LD39959p pro... 30 2.2
AE014296-1387|AAF50474.1| 441|Drosophila melanogaster CG7979-PA... 30 2.2
AE013599-3932|AAF47253.2| 657|Drosophila melanogaster CG4806-PA... 30 2.2
>AY069822-1|AAL39967.1| 655|Drosophila melanogaster SD07188p
protein.
Length = 655
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -2
Query: 618 IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
+A N + +F V W H D S FRVY + KPC Y++ + + T+ E++ Y
Sbjct: 351 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 401
Query: 438 RKFKSQAPATR 406
R+ QA A R
Sbjct: 402 RQVAKQATAKR 412
>AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p protein.
Length = 1311
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -2
Query: 618 IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
+A N + +F V W H D S FRVY + KPC Y++ + + T+ E++ Y
Sbjct: 1007 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 1057
Query: 438 RKFKSQAPATR 406
R+ QA A R
Sbjct: 1058 RQVAKQATAKR 1068
>AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DNA
helicase protein.
Length = 1311
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -2
Query: 618 IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
+A N + +F V W H D S FRVY + KPC Y++ + + T+ E++ Y
Sbjct: 1007 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 1057
Query: 438 RKFKSQAPATR 406
R+ QA A R
Sbjct: 1058 RQVAKQATAKR 1068
>AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB,
isoform B protein.
Length = 1311
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -2
Query: 618 IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
+A N + +F V W H D S FRVY + KPC Y++ + + T+ E++ Y
Sbjct: 1007 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 1057
Query: 438 RKFKSQAPATR 406
R+ QA A R
Sbjct: 1058 RQVAKQATAKR 1068
>AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA,
isoform A protein.
Length = 1311
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -2
Query: 618 IAYNHLRLFRVEWLLFHADRSSSFRVYLGQENKPCLYMFTIKLLRTICPNMSMKEEESYS 439
+A N + +F V W H D S FRVY + KPC Y++ + + T+ E++ Y
Sbjct: 1007 VAANRVVIFDVSWNPSH-DTQSIFRVYRFGQIKPC-YIYRLIAMGTM-------EQKVYE 1057
Query: 438 RKFKSQAPATR 406
R+ QA A R
Sbjct: 1058 RQVAKQATAKR 1068
>BT029945-1|ABM92819.1| 657|Drosophila melanogaster IP16959p
protein.
Length = 657
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 211 EHIRDKVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGRYC 366
E ++ +VLKN F+ S NR I L QN L ++A+T Y FR C
Sbjct: 361 EQVKTQVLKNLNRFV-SRNRLSIHNLPQNYDNEKLKQMALT--YTGFRPHEC 409
>BT023833-1|AAZ86754.1| 657|Drosophila melanogaster LD27920p
protein.
Length = 657
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 211 EHIRDKVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGRYC 366
E ++ +VLKN F+ S NR I L QN L ++A+T Y FR C
Sbjct: 361 EQVKTQVLKNLNRFV-SRNRLSIHNLPQNYDNEKLKQMALT--YTGFRPHEC 409
>AY069278-1|AAL39423.1| 318|Drosophila melanogaster GM13274p
protein.
Length = 318
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 211 EHIRDKVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGRYC 366
E ++ +VLKN F+ S NR I L QN L ++A+T Y FR C
Sbjct: 22 EQVKTQVLKNLNRFV-SRNRLSIHNLPQNYDNEKLKQMALT--YTGFRPHEC 70
>AY051913-1|AAK93337.1| 441|Drosophila melanogaster LD39959p
protein.
Length = 441
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 468 MSMKEEESYSRKFKSQAPATRERILLLSNEILSIAISTPK 349
M+ +E+ S R+ K++ TRE + L ++ S+ STP+
Sbjct: 63 MAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTSTPR 102
>AE014296-1387|AAF50474.1| 441|Drosophila melanogaster CG7979-PA
protein.
Length = 441
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 468 MSMKEEESYSRKFKSQAPATRERILLLSNEILSIAISTPK 349
M+ +E+ S R+ K++ TRE + L ++ S+ STP+
Sbjct: 63 MAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTSTPR 102
>AE013599-3932|AAF47253.2| 657|Drosophila melanogaster CG4806-PA
protein.
Length = 657
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 211 EHIRDKVLKNNKIFISSNNRSQIGILTQNSKERLLTRLAVTLSYLPFRGRYC 366
E ++ +VLKN F+ S NR I L QN L ++A+T Y FR C
Sbjct: 361 EQVKTQVLKNLNRFV-SRNRLSIHNLPQNYDNEKLKQMALT--YTGFRPHEC 409
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,697,991
Number of Sequences: 53049
Number of extensions: 432230
Number of successful extensions: 855
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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