Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O19
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    65   4e-13
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   6.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.2  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 65.3 bits (152), Expect = 4e-13
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 6   FGTRRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 185
           F + ++   +++HGD  Q ERE  +  F+TG  +VL+ T + ARG+D++ V  VINYDLP
Sbjct: 428 FLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLP 487

Query: 186 TNRENYXXXXXXXXXXXXXXXXXNFVTE-ADRRALKDIEEFYHTSISEMP 332
            + + Y                 +F  E  DR    D+ +    +  E+P
Sbjct: 488 KSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIP 537


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 246 FLYGRNDHLFRFY 208
           F+ G N H FRFY
Sbjct: 515 FMIGLNSHGFRFY 527


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 113 HHHRPTGSRYRRAASLLCHQL 175
           H HRP  ++ RR A++   QL
Sbjct: 304 HDHRPALAQQRRVAAVQVPQL 324


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 344 GHITGHFRNTSVIELLNILERSPVRFRDKVDGNSFTA 234
           G+IT H  NTS +        SP+ ++ + +  ++TA
Sbjct: 252 GNITPHGSNTSSLITTPSPSASPLAYQHEYNSFNWTA 288


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 92  YWFVSCAHHHRPTGSRYRRAAS 157
           Y +VS AHHH    +    AA+
Sbjct: 2   YPYVSAAHHHHQAAAAAFGAAA 23


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 92  YWFVSCAHHHRPTGSRYRRAAS 157
           Y +VS AHHH    +    AA+
Sbjct: 61  YPYVSAAHHHHQAAAAAFGAAA 82


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 92  YWFVSCAHHHRPTGSRYRRAAS 157
           Y +VS AHHH    +    AA+
Sbjct: 2   YPYVSAAHHHHQAAAAAFGAAA 23


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 92  YWFVSCAHHHRPTGSRYRRAAS 157
           Y +VS AHHH    +    AA+
Sbjct: 61  YPYVSAAHHHHQAAAAAFGAAA 82


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -3

Query: 348 GWPHHWAFPK 319
           GWP H   PK
Sbjct: 581 GWPQHMLIPK 590


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -3

Query: 348 GWPHHWAFPK 319
           GWP H   PK
Sbjct: 580 GWPQHMLLPK 589


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,195
Number of Sequences: 336
Number of extensions: 2576
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)