Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O18
         (298 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   1.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   3.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   3.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    19   8.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 241 LRFQCLANFLLVKVN 197
           LRF+CL N ++V  N
Sbjct: 39  LRFECLTNEMIVTKN 53


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +2

Query: 194 HIYLNEKEVGEALKAKFD 247
           H+Y N+++  + L+AK+D
Sbjct: 91  HLYKNKQDWWKQLEAKYD 108


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 112 HLEVEAG*SDSGCKGCRRYRLQAHRLCSHL 201
           HL V  G    GC+ C      +++L +H+
Sbjct: 209 HLRVHTGERPYGCEHCSMKFSDSNQLKAHV 238


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 53  SAGVPVIFNNGHTCPVIGLGTWK 121
           S  +  + N  H+ P+ G+G W+
Sbjct: 134 SGDIAGLRNKTHSQPMQGVGNWE 156


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 158 HPLQPESLHPASTSKCP 108
           H   P S +PA+   CP
Sbjct: 158 HGYHPSSSYPANEISCP 174


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 247 IELRFQCLANFLLVKVNVSTI 185
           + L  Q   +FLL+ +N+STI
Sbjct: 62  MRLIVQTCLDFLLLALNISTI 82


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 153 FTA*VTSPGFDFQVPNPITGQV 88
           + A   +P FD  + NPI  Q+
Sbjct: 310 YCAATKNPNFDKMIGNPICVQI 331



 Score = 19.4 bits (38), Expect = 8.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 81  LLKITGTPADIFNYLFKK 28
           L  I G PAD    LFK+
Sbjct: 87  LFVIRGQPADALPKLFKE 104


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 84  PLLKITGTPADIFN 43
           PLL +   P +I+N
Sbjct: 348 PLLTLNSVPTEIYN 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,239
Number of Sequences: 336
Number of extensions: 1578
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)