Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O18
(298 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 81 3e-17
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 81 5e-17
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 57 6e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 55 3e-09
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 55 3e-09
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 32 0.021
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 29 0.15
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 28 0.26
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 26 1.0
SPAC6F6.10c |arc2|arc34|ARP2/3 actin-organizing complex subunit ... 25 2.4
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 3.1
SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces pom... 24 5.5
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 23 7.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 23 9.6
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 23 9.6
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 23 9.6
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 23 9.6
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 23 9.6
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 81.0 bits (191), Expect = 3e-17
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +2
Query: 80 NGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
NG P IGLGTW+S E AV A+ GYRHID AHIY NEKE+GE ++ E V
Sbjct: 19 NGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR----ESGV 74
Query: 260 TREEIFITSQLWC 298
R +I++TS+LWC
Sbjct: 75 PRTDIWVTSKLWC 87
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 80.6 bits (190), Expect = 5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 80 NGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
+G P +GLGTW+S+P + AVK A+ GYRHID A IY NE EVG+ +K E V
Sbjct: 20 DGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK----ESGV 75
Query: 260 TREEIFITSQLWC 298
R++I++TS+LWC
Sbjct: 76 PRKDIWVTSKLWC 88
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 56.8 bits (131), Expect = 6e-10
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +2
Query: 68 VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFD 247
V NG P IG G + K E V A+D GYRHID A +Y NE G+A+ +
Sbjct: 11 VTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCE 70
Query: 248 EGVVTREEIFITSQL 292
+ V R +IF+TS+L
Sbjct: 71 KNNVKRTDIFLTSKL 85
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 54.8 bits (126), Expect = 3e-09
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 68 VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFD 247
V NNG CP G++ + +V A+ GYRHID A +Y NE + G A+ +
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 248 EGVVTREEIFITSQL 292
E RE+I+ TS+L
Sbjct: 66 ETGTKREDIWFTSKL 80
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 54.8 bits (126), Expect = 3e-09
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Frame = +2
Query: 95 PVIGLGT--WKSKPGEVTQ----AVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
P G+GT +K + GE+ + +VK+A+ G+ HIDCA +Y NE+EVG ALK E
Sbjct: 13 PAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EAN 68
Query: 257 VTREEIFITSQL 292
V R ++FITS++
Sbjct: 69 VPRSKLFITSKV 80
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.021
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -1
Query: 259 HNTFIELRFQCLANFLLVKVNVSTIDVPVTDIDGILYSLSHFTRLRLP 116
HN + E + F ++ +++P T DG Y++++F++L+LP
Sbjct: 300 HNYYEEYKSSYKKRFEILAKAFDQLEIPYTIPDGSYYTMANFSKLKLP 347
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 29.1 bits (62), Expect = 0.15
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 DIGYRHIDCAHIYLNEKEVGEALKAKFDEGVVTREEI 274
DI Y D IYL K+VG+ + K EGV T + I
Sbjct: 187 DIPYASDDSGDIYLPVKKVGKFIPTKRTEGVSTSDLI 223
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 28.3 bits (60), Expect = 0.26
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 119 KSKPGEVTQAVKDAVDIGYRHIDCAH--IYLNEKEVGEALKAKFDEGVV 259
+S PGEV Q V D DIG + H + L ++ ++ DE V+
Sbjct: 12 ESPPGEVNQVVHDIRDIGLSDEEAIHEQLKLYHEDYNSSVSISDDEKVI 60
>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 485
Score = 26.2 bits (55), Expect = 1.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 169 DIDGILYSLSHFTRLRLPSAQSYNRTSMSVVENNW 65
D + I SL +++R LPSA+++N S + + W
Sbjct: 328 DDEYIYESLVNYSRSSLPSAENWNVYSKKDIPSRW 362
>SPAC6F6.10c |arc2|arc34|ARP2/3 actin-organizing complex subunit
Arc34|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 199 NVSTIDVPVTDIDGILYSLS 140
N S+ID VTD DG+ + +S
Sbjct: 23 NPSSIDQVVTDFDGVTFHIS 42
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 120 FQVPNPITGQVCPLLKITGT-PADIFNYLFKKKTPNKL 10
+ +P P+ + + + + P D F LF+KKT NK+
Sbjct: 31 YSLPAPVAQKKNAQIPLKASKPEDPFANLFQKKTDNKI 68
>SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 23.8 bits (49), Expect = 5.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 152 LQPESLHPASTSKCPI 105
+QPE L+ SKCP+
Sbjct: 1 MQPEQLNQEEESKCPV 16
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 23.4 bits (48), Expect = 7.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 60 ASQLFSTTDILVLL*DWALGSRSRVKXXXXXXMPSISVTGTSIVLTFTLT 209
AS STT L+ L S S +PSIS T +S V T + T
Sbjct: 118 ASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFT 167
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 134 EVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFD 247
++ + +D + Y YLN++ V EAL ++D
Sbjct: 839 DIREECRDQEHLCYPETGAIESYLNQEFVQEALGVEYD 876
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 72 ITGTPADIFNYLFKKKTPNKLPSC 1
I+GT D NY+ K +LPSC
Sbjct: 131 ISGTLEDYDNYIEVLKEKLELPSC 154
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 23.0 bits (47), Expect = 9.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 189 VLTFTLTRRKLARH*KRSSMKVL*QGKKFSLRPNCG 296
V LTR+ L + K+L KKF L P CG
Sbjct: 163 VAAIGLTRKDLGKSLAEMQDKLLTLNKKFELHP-CG 197
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 68 VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIG 172
V+ TC IG+G K+ V A+ + IG
Sbjct: 101 VVATEEETCSQIGVGILKAGGNAVDAAIASGICIG 135
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 129 GFDFQV-PNPITGQVCPLLKITGTPADIFN 43
G +FQ P P G V P TGTP + N
Sbjct: 57 GNEFQASPPPPLGYVTPEYGATGTPVNANN 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,371,152
Number of Sequences: 5004
Number of extensions: 27840
Number of successful extensions: 92
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 73880280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -