Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O18
(298 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 108 9e-25
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 104 1e-23
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 92 6e-20
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 86 4e-18
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 77 3e-15
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 64 2e-11
04_01_0350 - 4610444-4610668,4612181-4612969 60 3e-10
10_01_0065 + 845447-846187,846969-847193 58 9e-10
10_01_0066 + 848523-849269,849520-849741 58 1e-09
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 58 2e-09
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 57 2e-09
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 57 3e-09
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 54 2e-08
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 53 3e-08
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 51 1e-07
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 35 0.013
03_03_0219 - 15519076-15520050,15520376-15520579,15520755-155207... 28 1.5
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232... 27 2.0
01_05_0091 + 18048595-18050559 27 3.5
04_03_0733 + 19116771-19116957,19117733-19117858,19117946-191180... 26 4.6
01_05_0319 - 20871781-20871909,20872001-20872053,20873271-20873598 26 6.0
12_01_0064 - 553733-553821,554186-554277,554332-554360,554554-55... 25 8.0
11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47... 25 8.0
08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757... 25 8.0
06_01_0032 + 343157-343507 25 8.0
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 108 bits (259), Expect = 9e-25
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDE 250
+ N G P +GLGTW+++PG V AV AV GYRHIDCA Y NEKE+G ALK FDE
Sbjct: 6 VLNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDE 65
Query: 251 GVVTREEIFITSQLWC 298
G+V RE+IFITS+LWC
Sbjct: 66 GIVKREDIFITSKLWC 81
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 104 bits (250), Expect = 1e-23
Identities = 47/76 (61%), Positives = 55/76 (72%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDE 250
+ N G P +GLGTW+S PG V AV AV GYRHIDCA +Y NE EVG ALK F+E
Sbjct: 6 VLNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEE 65
Query: 251 GVVTREEIFITSQLWC 298
GVV RE++FITS+LWC
Sbjct: 66 GVVKREDLFITSKLWC 81
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 92.3 bits (219), Expect = 6e-20
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEV-GEALKAKFDEG 253
N G P +GLGT+K+ G V V AV GYRHIDCA +Y NE+EV G ALK FD+G
Sbjct: 8 NTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDDG 67
Query: 254 VVTREEIFITSQLWC 298
VV RE++FITS++WC
Sbjct: 68 VVKREDLFITSKIWC 82
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 86.2 bits (204), Expect = 4e-18
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 56 AGVP--VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEA 229
+GVP + ++GHT P +GLG W+ + + A+ IGYRH DCA Y NE EVG+A
Sbjct: 7 SGVPAALALSSGHTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDA 66
Query: 230 LKAKFDEGVVTREEIFITSQLW 295
L F G+V RE++FIT++LW
Sbjct: 67 LAEAFQTGLVKREDLFITTKLW 88
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/60 (60%), Positives = 40/60 (66%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDE 250
+ N G P +GLGTW+S PG V AV AV GYRHIDCA Y NEKEVG ALK F+E
Sbjct: 6 VLNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKP-GEVT--QAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG 253
G P +GLGT + GE + A+ A+++GYRHID A +Y +E+ VGEA+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 254 VVT-REEIFITSQLWC 298
V+ REE+F+T+++WC
Sbjct: 85 VIACREEVFVTTKVWC 100
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +2
Query: 53 SAGVP-VIFNNGHTCPVIGLGTWKSKP-GEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGE 226
+ VP V N+GH PV+G GT S P ++ + AV +GYRH+D A +Y E VG
Sbjct: 17 ATAVPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGA 76
Query: 227 ALKAKFDEG-VVTREEIFITSQL 292
A+ G V +R E+F+T++L
Sbjct: 77 AVAEAVRCGAVASRGELFVTTKL 99
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 58.4 bits (135), Expect = 9e-10
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 TCPVIGLGTWK---SKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
T P +G+GT + + T A+ A+++GYRH D A IY E VGEA+ G++
Sbjct: 15 TMPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLI 74
Query: 260 -TREEIFITSQLWC 298
+R ++F+TS++WC
Sbjct: 75 ASRADVFVTSKIWC 88
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 TCPVIGLGTWK---SKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
T P IG+GT + E T A+ A+++GYRH D A +Y E V EA+ G+V
Sbjct: 17 TMPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLV 76
Query: 260 -TREEIFITSQLWC 298
+R ++F+TS+LWC
Sbjct: 77 ASRADVFVTSKLWC 90
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 57.6 bits (133), Expect = 2e-09
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 83 GHTCPVIGLGTWKS---KPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG 253
G P +G+GT S P A A+++G+RH D A +Y E +GEA+ G
Sbjct: 14 GRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAPLGEAIAEATRRG 73
Query: 254 VV-TREEIFITSQLWC 298
+V +REE+F+T++LWC
Sbjct: 74 LVASREEVFVTTKLWC 89
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 57.2 bits (132), Expect = 2e-09
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +2
Query: 95 PVIGLGT--WKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV-TR 265
P +G+G + S P AV A++ G+RH D A +Y E +GEA+ G++ +R
Sbjct: 19 PAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIAEATRRGLLASR 78
Query: 266 EEIFITSQLWC 298
EE F+T++LWC
Sbjct: 79 EEAFVTTKLWC 89
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 56.8 bits (131), Expect = 3e-09
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 83 GHTCPVIGLGTWKS--KPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG- 253
G P +G+GT +P + +AV A++ GYRH D A Y E +GEA G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 254 VVTREEIFITSQLWC 298
+ +R ++FITS+LWC
Sbjct: 72 IASRADLFITSKLWC 86
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 54.4 bits (125), Expect = 2e-08
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = +2
Query: 53 SAGVP-VIFNNGHTCPVIGLGTWK------SKPGEVTQAVKDAVDIGYRHIDCAHIYLNE 211
+A +P +G P++G+GT P V AV A+D GYRH D A Y E
Sbjct: 13 AATIPEAALRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTE 72
Query: 212 KEVGEALKAKFDEGVV-TREEIFITSQLW 295
+GEA+ G+V +R++++ITS+LW
Sbjct: 73 APLGEAVLEAVRAGMVASRDDLYITSKLW 101
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 53.2 bits (122), Expect = 3e-08
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWK-----SKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAK 241
++G P +G+GT + P V V A++ GYRH D A +Y E +G+A+
Sbjct: 7 SSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAEA 66
Query: 242 FDEGVV-TREEIFITSQLW 295
G+V +R+E++ITS+LW
Sbjct: 67 VRAGLVASRDELYITSKLW 85
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 170 GYRHIDCAHIYLNEKEVGEALKAKFDEGVVTREEIFITSQLWC 298
GYRH+D A Y E+EVG+ LKA + G + R+++F+TS++WC
Sbjct: 92 GYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFVTSKIWC 133
Score = 29.5 bits (63), Expect = 0.49
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAV 163
+ +GH P +GLGTW++ + +V+ A+
Sbjct: 15 VLKSGHAIPAVGLGTWRA-GSDTAHSVQTAI 44
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 34.7 bits (76), Expect = 0.013
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 167 IGYRHIDCAHIYLNEKEVGEALKAK 241
+GYRHIDC+ Y N+KEV ++AK
Sbjct: 35 VGYRHIDCSPQYGNQKEVHGPVRAK 59
>03_03_0219 -
15519076-15520050,15520376-15520579,15520755-15520791,
15522025-15522104
Length = 431
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 77 NNGHTC-PVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG 253
NN T P++ GT + P + D+G ++ +C H N +E+ L + DEG
Sbjct: 219 NNTFTVGPLLSKGTLDTVPELQGSNETNVTDVGAQNTECMH--ENTEEIDALLCSDSDEG 276
Query: 254 VVTREEI 274
+ +E+
Sbjct: 277 CLKVQEL 283
>01_06_1086 -
34421837-34422311,34422426-34422612,34423162-34423291,
34423485-34423720,34423804-34423961,34424048-34424128,
34424216-34424281,34424364-34424432,34424722-34424866,
34425645-34426138,34426244-34426811,34429529-34429574
Length = 884
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = -1
Query: 244 ELRFQCLANF-----LLVKVNVSTIDVPVTDIDGILYSLSHFTRLRLPSAQSY-NRTSMS 83
E + CL NF + + + +D P+ + S+S+FTR+R + + R
Sbjct: 150 EFIYVCLVNFGSGTPFISALELRQLDDPMYPFLNLFVSVSYFTRMRFGAVDDFITRYPTD 209
Query: 82 VVENNWDAGR 53
+ + W+A +
Sbjct: 210 LFDRFWEAAQ 219
>01_05_0091 + 18048595-18050559
Length = 654
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 65 PVIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDI 169
P + N CPV+ W S GE KD V++
Sbjct: 187 PALLGNHLLCPVLSAAAWVS--GEYVNFTKDPVEL 219
>04_03_0733 +
19116771-19116957,19117733-19117858,19117946-19118061,
19118395-19118483,19118692-19118743,19119361-19119829,
19120985-19121367,19121450-19122132,19122561-19123152,
19123255-19123638,19124106-19124114
Length = 1029
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 169 DIDGILYSLSHFTRLRLPSAQSYNRTSMSVVE--NNWDAGRHF 47
DID + + + + LP+ Q Y++ ++S+ + W RHF
Sbjct: 846 DIDELAAASRSYYQSLLPNGQFYDKAAVSIQKKFKGWKGRRHF 888
>01_05_0319 - 20871781-20871909,20872001-20872053,20873271-20873598
Length = 169
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 230 MPRQLPSR*GKCEHNRCACNRYRRHPL-QPESLHPASTS 117
+P L S+ G C R AC R H + +P ++ ++T+
Sbjct: 129 LPSVLSSKRGPCRDQRVACGRRSAHLIHRPRAVSDSATA 167
>12_01_0064 -
553733-553821,554186-554277,554332-554360,554554-554958,
555046-555333,555412-555499,556428-556626,556738-556876,
556991-557041
Length = 459
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 157 ILYSLSHFTRLRLPSAQSYNRTSMSVV 77
+L +LSH L LP+A N T + VV
Sbjct: 297 VLTALSHVAHLELPAAADGNPTRIPVV 323
>11_01_0062 -
476027-476044,476791-477195,477287-477574,477653-477830,
478005-478133,478531-478729,478832-478970,479130-479195,
480459-480580,480672-480742,480819-480903,481335-481453,
481577-481687,481945-482117,482375-482446,482768-482862,
483361-483450,483550-483646
Length = 818
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 157 ILYSLSHFTRLRLPSAQSYNRTSMSVV 77
+L +LSH L LP+A N T + VV
Sbjct: 720 VLTALSHVAHLELPAAADGNPTRIPVV 746
>08_01_0009 +
68825-68950,72571-72669,72841-72929,74971-75087,
75747-75906,76419-76549,76810-76906,77584-77877
Length = 370
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 98 VIGLGTWKSKPGEVTQAVKDA 160
V G G WKS PG+ T DA
Sbjct: 6 VSGKGRWKSAPGQRTHGELDA 26
>06_01_0032 + 343157-343507
Length = 116
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 111 PNPITGQVCPLLKIT-GTPADIFNYLFKKKTPNKLPSC 1
P P CP+ + G AD+ + L TP K P C
Sbjct: 27 PCPTPAGKCPINTVKLGVCADVLDGLIHASTPPKEPCC 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,755,592
Number of Sequences: 37544
Number of extensions: 178554
Number of successful extensions: 490
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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