Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O18
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 116 3e-27
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 116 3e-27
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 94 2e-20
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 83 5e-17
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 74 2e-14
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 71 1e-13
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 69 5e-13
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 67 2e-12
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 65 7e-12
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 60 4e-10
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 51 1e-07
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 43 5e-05
Z81116-3|CAB03303.1| 346|Caenorhabditis elegans Hypothetical pr... 28 1.4
U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell m... 27 1.8
AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein. 27 1.8
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 27 2.4
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 27 2.4
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 27 2.4
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 26 4.2
Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical p... 26 5.6
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 25 7.4
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 116 bits (279), Expect = 3e-27
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G++ P IGLGTW+SKPGEV A+K AV GYRHIDCAH+Y N+KEVGEALK DEG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 257 VTREEIFITSQLW 295
V REE+FITS++W
Sbjct: 68 VKREELFITSKVW 80
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 116 bits (279), Expect = 3e-27
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G++ P IGLGTW+SKPGEV A+K AV GYRHIDCAH+Y N+KEVGEALK DEG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 257 VTREEIFITSQLW 295
V REE+FITS++W
Sbjct: 68 VKREELFITSKVW 80
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +2
Query: 53 SAGVPVIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEAL 232
SA + +NG PVIGLGTW+S P EV AVK AV GYR ID A +Y NE+ +G A+
Sbjct: 3 SATASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAI 62
Query: 233 KAKFDEGVVTREEIFITSQLW 295
K +EGVV REE+FIT++ W
Sbjct: 63 KELLEEGVVKREELFITTKAW 83
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 82.6 bits (195), Expect = 5e-17
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 MSAGVPVI-FNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGE 226
MS+ VP+ +NG P IGLGTW+ E +++AV GYRHID A +Y NE ++G+
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 227 ALKAKFDEGVVTREEIFITSQLWC 298
AL F EG++ RE+IFIT++ +C
Sbjct: 61 ALAELFAEGILKREDIFITTKAFC 84
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 73.7 bits (173), Expect = 2e-14
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
+N H+ P +GLGTW+S +V AVK AV GY ID A Y NE+ +G A+K EGV
Sbjct: 51 SNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGV 110
Query: 257 VTREEIFITSQL 292
V RE++FIT+++
Sbjct: 111 VKREDLFITTKV 122
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKP-GEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG 253
N G P+ GLGTW+ K E+T A++ A+D GYR ID AH+Y NE +G+ L G
Sbjct: 9 NTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSG 68
Query: 254 VVTREEIFITSQL 292
+ RE+IF+TS+L
Sbjct: 69 KLKREDIFVTSKL 81
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 69.3 bits (162), Expect = 5e-13
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = +2
Query: 68 VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFD 247
V N+G+ PVIG GTW+ + V+DA++ GYRHID A + N++EV +K
Sbjct: 7 VTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCK 66
Query: 248 EGVVTREEIFITSQLW 295
V REE+F++S++W
Sbjct: 67 IRKVRREELFLSSKIW 82
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 67.3 bits (157), Expect = 2e-12
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N G+ CP+IGLGT+K +V + A+ GYR D A +Y NEKE+G+AL+ +
Sbjct: 6 NTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHN 65
Query: 257 VTREEIFITSQL 292
+ RE+IFIT+++
Sbjct: 66 LKREDIFITTKM 77
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 65.3 bits (152), Expect = 7e-12
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G+ P +G GT+K V A+ A+ GYR D A YLNEKE+GEALK +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 257 VTREEIFITSQLW 295
++R ++F+TS+ +
Sbjct: 76 LSRSDVFLTSKFF 88
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 80 NGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
NG P + LGT+++K ++ AV +A+ +GYR D A Y NEK++G ALK +
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 260 TREEIFITSQLW 295
E+I++TS+++
Sbjct: 66 CSEDIYLTSKVF 77
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 56.0 bits (129), Expect = 5e-09
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 95 PVIGLGTWKSKPGEVTQAVKDA-VDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVVTREE 271
P+IG+GTW+ + E+ + V DA GYR ID A +Y NE ++G L+ + RE+
Sbjct: 12 PLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRED 71
Query: 272 IFITSQL 292
I+ITS+L
Sbjct: 72 IWITSKL 78
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 74 FNNGHTCPVIGLGTWKSKPGE-VTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDE 250
F++G+ P IGLG + + + + +++ A+ GYR D A++Y NE +G +LK +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 251 GVVTREEIFITSQL 292
+TRE++FIT+++
Sbjct: 74 FGLTREDVFITTKV 87
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 42.7 bits (96), Expect = 5e-05
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVD-IGYRHIDCAHIYLNEKEVGEALKAKFD 247
+ +N P+IGLGT S G AV ++ GYR ID A Y EK++G A+K
Sbjct: 6 VLSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK---- 60
Query: 248 EGVVTREEIFITSQLW 295
V REE+F++++LW
Sbjct: 61 NCSVPREEMFLSTKLW 76
>Z81116-3|CAB03303.1| 346|Caenorhabditis elegans Hypothetical
protein T06C12.3 protein.
Length = 346
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 160 GILYSLSHFTRLRLPSAQSYNRTSMSVVENNWDAGRHF 47
G L+SLS F + P A +YNR + N+W + + F
Sbjct: 51 GFLFSLSEF--IARPFAHNYNRALILFSINDWISSKSF 86
>U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell
migration protein 23 protein.
Length = 552
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 PVIFNNGHTCPVI--GLGTWKSKPGEVTQAVKDAVDIGYRHI 184
PVI++N I GL T+ +KP + + ++ +++ RHI
Sbjct: 75 PVIYDNKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHI 116
>AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein.
Length = 552
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 PVIFNNGHTCPVI--GLGTWKSKPGEVTQAVKDAVDIGYRHI 184
PVI++N I GL T+ +KP + + ++ +++ RHI
Sbjct: 75 PVIYDNKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHI 116
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 505 GHTAPILGLYTWSQAGNQFVSCSQD 529
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 771 GHTAPILGLYTWSQAGNQFVSCSQD 795
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 771 GHTAPILGLYTWSQAGNQFVSCSQD 795
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 156 MPSISVTGTSIVLTFTLTRRKL 221
+PSI +T T+I+LTF L ++K+
Sbjct: 230 LPSIILTITAILLTFQLKKQKI 251
>Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical
protein T07G12.6 protein.
Length = 600
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 106 IGHLEVEAG*SDSGCKGCRRYRLQAHRLCSHLP*REGSWRGIESEVR 246
+ HL+++ D CKG R RL H SH P + + GI+S VR
Sbjct: 489 VPHLKMKCNFCDYMCKGIRNIRL--HHKKSH-PDEQLTGFGIKSVVR 532
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 223 ANFLLVKVNVSTIDVPVTDIDGILYSLSHFTRL 125
AN L K NV ID+P + D L S FT++
Sbjct: 114 ANDLKGKKNVQVIDLPSIERDEYLQSDEKFTKI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,659,530
Number of Sequences: 27780
Number of extensions: 161702
Number of successful extensions: 392
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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