Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O18
         (298 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   4.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   9.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   9.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   9.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   9.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 130 RLRLPSAQSYNRTSMSVVENNWDAGR 53
           R R+ +A + NR  +S   N+WD+GR
Sbjct: 250 RSRMLTA-TVNRNHLSGGTNHWDSGR 274


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 164 DIGYRHIDCAHIYLNEKEVGE--ALKAKFDE 250
           D+G  H  C  I  + K VGE  A+  KF+E
Sbjct: 188 DLGKFHRVCTQIGSSMKSVGEVMAIGRKFEE 218


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 295 PQLGRNENFFPCHNTFIELRFQCLANFLLVKVN 197
           P+L R+  +    NT      +C A FLL+K N
Sbjct: 679 PKLARSVLYKIYLNTMESHEVRCTAVFLLMKTN 711


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 297 HHNWDVMKISSLVTTPSSNFAFNASPTS 214
           HH+ +    SSLV++ S++ A +A+  S
Sbjct: 173 HHHQNGATPSSLVSSASASSAVSAASAS 200


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 81  LLKITGTPADIFNYLFKK 28
           L  I G PAD    LFK+
Sbjct: 91  LFVIRGQPADALPKLFKE 108


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 175 VTDIDGILYSLSHFTRL 125
           + DI+GI   L HF  +
Sbjct: 48  IGDIEGIKEKLDHFLEM 64


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 283 RNENFFPC 260
           RNE ++PC
Sbjct: 224 RNEEYYPC 231


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 234 FNASPTSFS 208
           FNASPT++S
Sbjct: 513 FNASPTTWS 521


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 175 VTDIDGILYSLSHFTRL 125
           + DI+GI   L HF  +
Sbjct: 48  IGDIEGIKEKLDHFLEM 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,872
Number of Sequences: 438
Number of extensions: 2268
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)