Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O17
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095189-1|AAM12282.1|  201|Drosophila melanogaster LD26817p pro...    79   6e-15
AE014296-1249|AAN12062.1|  201|Drosophila melanogaster CG8580-PB...    79   6e-15
AE014296-1248|AAF50569.1|  201|Drosophila melanogaster CG8580-PA...    79   6e-15
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    28   8.6  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    28   8.6  

>AY095189-1|AAM12282.1|  201|Drosophila melanogaster LD26817p
           protein.
          Length = 201

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 21/105 (20%)
 Frame = +2

Query: 239 MACATLKRNLDWESMAQLPAKRRRCSPFAASS-------------STSPGI--------K 355
           MACATLKR LDWESM Q P KRRRC+PF  +              STS G+         
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 356 VSETKPSIFGESVSAPVKMTPERMAQEICDEIKRLQRRRQLRVAN 490
              T+PS F ES  A  KM+P++MA+ +C+EIKRL +R+QL + +
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITS 103


>AE014296-1249|AAN12062.1|  201|Drosophila melanogaster CG8580-PB,
           isoform B protein.
          Length = 201

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 21/105 (20%)
 Frame = +2

Query: 239 MACATLKRNLDWESMAQLPAKRRRCSPFAASS-------------STSPGI--------K 355
           MACATLKR LDWESM Q P KRRRC+PF  +              STS G+         
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 356 VSETKPSIFGESVSAPVKMTPERMAQEICDEIKRLQRRRQLRVAN 490
              T+PS F ES  A  KM+P++MA+ +C+EIKRL +R+QL + +
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITS 103


>AE014296-1248|AAF50569.1|  201|Drosophila melanogaster CG8580-PA,
           isoform A protein.
          Length = 201

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 21/105 (20%)
 Frame = +2

Query: 239 MACATLKRNLDWESMAQLPAKRRRCSPFAASS-------------STSPGI--------K 355
           MACATLKR LDWESM Q P KRRRC+PF  +              STS G+         
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 356 VSETKPSIFGESVSAPVKMTPERMAQEICDEIKRLQRRRQLRVAN 490
              T+PS F ES  A  KM+P++MA+ +C+EIKRL +R+QL + +
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITS 103


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 323 AASSSTSPGIKVSETKPSIFGESVSAPVKMTPERMAQEICDEI-KRLQRRRQLR 481
           ++SSSTSP    S T  +    S S+    +      E  D + +RL+R R+LR
Sbjct: 74  SSSSSTSPTSSTSSTTATTTAPSTSSDTSSSSTSSDSEEVDRLRRRLRRLRRLR 127


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 323 AASSSTSPGIKVSETKPSIFGESVSAPVKMTPERMAQEICDEI-KRLQRRRQLR 481
           ++SSSTSP    S T  +    S S+    +      E  D + +RL+R R+LR
Sbjct: 74  SSSSSTSPTSSTSSTTATTTAPSTSSDTSSSSTSSDSEEVDRLRRRLRRLRRLR 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,175,205
Number of Sequences: 53049
Number of extensions: 495520
Number of successful extensions: 1160
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)