Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O16
(611 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 42 9e-04
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 42 9e-04
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 39 0.006
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 31 1.2
BT010303-1|AAQ23621.1| 536|Drosophila melanogaster LD04013p pro... 29 3.7
AF177464-1|AAD55946.1| 562|Drosophila melanogaster Tob homolog ... 29 3.7
AE014298-2329|AAS65384.1| 564|Drosophila melanogaster CG9214-PB... 29 3.7
AE014298-2328|AAF48563.1| 564|Drosophila melanogaster CG9214-PA... 29 3.7
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +3
Query: 6 RQACIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVY 185
R+AC A++ + AC A Y + +LP C++C H GD +
Sbjct: 2991 RKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEF 3050
Query: 186 QLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLEEQ 314
+K+PN + D+V + + +L+ P I + ++L +
Sbjct: 3051 TVKLPNNKVDVVFVVDINVT-PGVLSNLIAPAINDIRESLRSR 3092
Score = 35.5 bits (78), Expect = 0.057
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 301 TLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFD 480
+L+S+ +D+++ + YP L +D K+++ ++ +K+ CD
Sbjct: 3088 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 3143
Query: 481 KY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 609
+ EK ++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3144 EQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +3
Query: 6 RQACIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVY 185
R+AC A++ + AC A Y + +LP C++C H GD +
Sbjct: 2991 RKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEF 3050
Query: 186 QLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLEEQ 314
+K+PN + D+V + + +L+ P I + ++L +
Sbjct: 3051 TVKLPNNKVDVVFVVDINVT-PGVLSNLIAPAINDIRESLRSR 3092
Score = 35.5 bits (78), Expect = 0.057
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 301 TLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFD 480
+L+S+ +D+++ + YP L +D K+++ ++ +K+ CD
Sbjct: 3088 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 3143
Query: 481 KY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 609
+ EK ++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3144 EQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p
protein.
Length = 1074
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 63 ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQ 242
AC A Y + +LP C++C H GD + +K+PN + D+V +
Sbjct: 733 ACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINV 792
Query: 243 SNEQSYKDLVMPLITQLVDNLEEQ 314
+ +L+ P I + ++L +
Sbjct: 793 T-PGVLSNLIAPAINDIRESLRSR 815
Score = 35.5 bits (78), Expect = 0.057
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 301 TLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFD 480
+L+S+ +D+++ + YP L +D K+++ ++ +K+ CD
Sbjct: 811 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 866
Query: 481 KY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 609
+ EK ++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 867 EQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 915
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -1
Query: 599 LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 444
+TA GR+ DF+L +++KP+FI+ +SI + VS VL G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050
>BT010303-1|AAQ23621.1| 536|Drosophila melanogaster LD04013p
protein.
Length = 536
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 149 GAAHASVRQHSRQQSREGQRRVSSRQ 72
G HA+ +QHS+QQ+R G R +S +
Sbjct: 383 GNGHANTQQHSQQQTRVGMDRPNSSE 408
>AF177464-1|AAD55946.1| 562|Drosophila melanogaster Tob homolog
protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 149 GAAHASVRQHSRQQSREGQRRVSSRQ 72
G HA+ +QHS+QQ+R G R +S +
Sbjct: 407 GNGHANTQQHSQQQTRVGMDRPNSSE 432
>AE014298-2329|AAS65384.1| 564|Drosophila melanogaster CG9214-PB,
isoform B protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 149 GAAHASVRQHSRQQSREGQRRVSSRQ 72
G HA+ +QHS+QQ+R G R +S +
Sbjct: 411 GNGHANTQQHSQQQTRVGMDRPNSSE 436
>AE014298-2328|AAF48563.1| 564|Drosophila melanogaster CG9214-PA,
isoform A protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 149 GAAHASVRQHSRQQSREGQRRVSSRQ 72
G HA+ +QHS+QQ+R G R +S +
Sbjct: 411 GNGHANTQQHSQQQTRVGMDRPNSSE 436
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,179,030
Number of Sequences: 53049
Number of extensions: 496180
Number of successful extensions: 1477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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